Gene SeHA_C1966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1966 
Symbol 
ID6488361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1917061 
End bp1918161 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content51% 
IMG OID642742171 
Productcalcium/sodium:proton antiporter 
Protein accessionYP_002045814 
Protein GI194447927 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0387] Ca2+/H+ antiporter 
TIGRFAM ID[TIGR00378] calcium/proton exchanger (cax)
[TIGR00846] calcium/proton exchanger 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value0.788667 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACATG CCTGTGAGGC GGTGAAAACC CGCCATAAGG AGACTTCGCT TATTTTCCCG 
GTTCTTGCGC TGGTAGTGCT GTTCCTTTGG GGAAGCAGCC AGTCACTACC AGTGGTTATT
GGCATCAATA TCCTTGCACT TATTGGTATT TTAAGCAGCG CATTTAGCGT GGTCCGTCAT
GCCGATGTAT TAGCGCACCG ACTCGGCGAA CCCTACGGAT CGCTTATTTT AAGCCTGTCC
GTCGTTATTC TTGAGGTGAG TTTAATTTCA GCGCTGATGG CCACCGGCGA TGCTGCGCCA
ACGCTTATGC GCGATACGCT CTACTCTATT ATTATGATTG TCACCGGGGG ACTGGTCGGT
TTCTCGTTGT TGTTGGGCGG GCGTAAATTC GCAACGCAAT ATATGAATTT ATTTGGGATT
AAGCAGTATC TTATCGCGCT GTTTCCGCTG GCGATTATTG TGCTGGTTTT TCCAATGGCA
TTGCCGCAAG CCAATTTCTC TACCGGTCAG GCATTATTGG TCGCGTTAAT TTCCGCCGCG
ATGTACGGCG TATTTTTGTT GATTCAAACC AAAACGCACC AGAGCTTATT TATCTATGAA
CATGAAGATG AAGGCGATGA TGACAATCCA CACCACGGTA AACCCTCCGC GCACAGTAGC
GGCTGGCATA CGGTCTGGTT ACTCATTCAT TTAATTGCGG TCATTGCCGT TACCAAAATG
AATGCCAGCC CGCTGGAGGC GTTGCTGACC AGCATGAACG CCCCGGTCGC CTTTACCGGT
TTCCTGGTCG CGCTGTTAAT TCTCTCGCCG GAAGGACTGG GCGCGCTGAA GGCGGTACTG
AATAATCAGG TTCAGCGGGC AATGAATCTG TTCTTCGGAT CGGTGTTGGC GACGATTTCA
TTAACCGTGC CGGTCGTCAC GCTCATCGCC TGGGCGACAG GTAATGATCT GGTATTTGGT
TTAGGCGCGC CGGAAATGAT AGTGATGGTG GCCTCGTTAG TGCTGTGCCA TATTTCGTTC
TCTACCGGAC GCACCAACGT GCTAAACGGC GCGGCGCATC TGGCTTTATT TGCCGCCTAT
CTGATGACGA TTTTTGCCTG A
 
Protein sequence
MTHACEAVKT RHKETSLIFP VLALVVLFLW GSSQSLPVVI GINILALIGI LSSAFSVVRH 
ADVLAHRLGE PYGSLILSLS VVILEVSLIS ALMATGDAAP TLMRDTLYSI IMIVTGGLVG
FSLLLGGRKF ATQYMNLFGI KQYLIALFPL AIIVLVFPMA LPQANFSTGQ ALLVALISAA
MYGVFLLIQT KTHQSLFIYE HEDEGDDDNP HHGKPSAHSS GWHTVWLLIH LIAVIAVTKM
NASPLEALLT SMNAPVAFTG FLVALLILSP EGLGALKAVL NNQVQRAMNL FFGSVLATIS
LTVPVVTLIA WATGNDLVFG LGAPEMIVMV ASLVLCHISF STGRTNVLNG AAHLALFAAY
LMTIFA