Gene SeHA_C1961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1961 
Symbol 
ID6491535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1912086 
End bp1913882 
Gene Length1797 bp 
Protein Length598 aa 
Translation table11 
GC content54% 
IMG OID642742166 
Productnitrate/nitrite sensor protein NarX 
Protein accessionYP_002045809 
Protein GI194449232 
COG category[T] Signal transduction mechanisms 
COG ID[COG3850] Signal transduction histidine kinase, nitrate/nitrite-specific 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value0.68817 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAAAC GGTGTTTCTC TCCTCTTACG CTGGTTAACC AACTGGCGCT GATTGTCATG 
CTCTCTACCG CTATCGGCGT GGCGGGGATG GCGGTTTCCG GCTGGCTGGT TCAGGGTGTG
CAGGGTAGCG CTCATGCGAT TAATAAAGCG GGCTCATTGC GTATGCAAAG CTATCGACTA
CTGGCAGCTG TCCCGCTGGA TGCTAAAGAT CAAAAGCTGC TGGATGAGAT GGAGCAAACG
GCATTCAGCC CTGAACTGAC CCGCGCCGCT GAGCGAGACG GGCAGCAGAA GCAGCTTAAA
GCGTTGCAGG ATTACTGGCA TAACGAACTC TCGCCAGGGC TACAGCACGC GCAAAACGCG
CACGCGGTCG CAGAAGATGT CACGCGCTTT GTGGCGGGCC TGGATCGCCT GGTGACGTCG
TTCGACCATA CGACTGAATT GCGTATCGAA CGCGTGGTAT TAGTTCACCG GGTAATGGCG
ATCTTTATGG CGCTATTGCT GGTATTTACG ATTATCTGGC TACGTGTTCG CCTTTTGCAG
CCCTGGAAAC AGTTGTTATC AATGGCGCGC GCCGTCAGTC AGCGCGACTT TACCCAACGT
GCCAATATCA GTGGACGCAA TGAGATGGCC GCGTTGGGTT CTGCGCTCAA TAATATGTCT
GAAGAACTGG CCGAAAGTTA TGCGGTACTG GAACAGCGCG TACAGGAAAA AACAGCCGGT
CTGGAACATA AAAACCAGAT TCTCTCGTTT TTGTGGCAAG CCAACCGCCG ACTGCATTCA
CAGGCTCCGC TATGTGAGCG TCTTTCACCG GTACTGAATG GCCTGCAAAA TTTAACCCAG
TTGCATGATA TTGAGCTGCG GGTCTATGAC CTGGAAGATG AAGATAATCA CCAGGAATTT
ACCTGTCAGT CGGACATCAG TTGCGATGAT AAAGGCTGCC ACCTTTGCCC ACGTAGCGCC
CTGCCGATGA TTAACGGCGG CACCACCTTA AAATGGCGGC TCACCGACTC TCACACCCAA
TACGGTATTT TGCTGGCGAC GCTGCCCTAT GGACGCCATC TCAGCCACGA TCAACAACAG
TTGGTGGACA CGCTGGTTGA ACAGCTTACC GCGACTCTGG CGCTCGACAG GCATCAGGAG
CGCCAGCAGC AGTTGATTGT CATGGAAGAG CGTGCCACCA TTGCCCGCGA ACTGCATGAT
TCTATTGCCC AGTCGCTCTC TTGTATGAAG ATGCAGGTGA GCTGCCTGCA AATGCAGGGC
GACGTGTTAC CGGAAAGCAG CCGTGAGTTA CTCAGCCAAA TTCGCAATGA GCTAAACTGC
TCCTGGGCGC AACTGCGCGA ACTGTTAACC ACTTTCCGGT TACAGTTGAC GGAACCCGGG
CTACGTCCGG CGCTGGAGGC AAGCTGCCAG GAGTTCAGCG CCCGGTTTGG CTTTACGGTA
AAACTGGATT ATCAGCTTCC CCCCCGCCTG GTGCCTTCAC ACCAGGCGAT ACACCTGTTG
CAAATTGCCA GGGAAGCCCT CAGCAACGCC CTTAAACACT CTCATGCCGA CGATGTGGTG
GTGACAGTGA CGCAATGTGG CAAACAGGTC AAACTAAAAG TGCAGGATAA TGGCTGCGGC
GTCCCGGAAA ACGCCGAACG CAGTAATCAC TACGGCATGA TCATCATGCG CGATCGGGCG
CAAAGTTTGC GCGGCGATTG CCAGGTACGC CGACGCGAGA CTGGCGGAAC AGAGGTCACT
GTTACTTTTA TTCCAGAAAC AAACTTCACA GAAACCCAGG GAGATACCCA TGAATAA
 
Protein sequence
MFKRCFSPLT LVNQLALIVM LSTAIGVAGM AVSGWLVQGV QGSAHAINKA GSLRMQSYRL 
LAAVPLDAKD QKLLDEMEQT AFSPELTRAA ERDGQQKQLK ALQDYWHNEL SPGLQHAQNA
HAVAEDVTRF VAGLDRLVTS FDHTTELRIE RVVLVHRVMA IFMALLLVFT IIWLRVRLLQ
PWKQLLSMAR AVSQRDFTQR ANISGRNEMA ALGSALNNMS EELAESYAVL EQRVQEKTAG
LEHKNQILSF LWQANRRLHS QAPLCERLSP VLNGLQNLTQ LHDIELRVYD LEDEDNHQEF
TCQSDISCDD KGCHLCPRSA LPMINGGTTL KWRLTDSHTQ YGILLATLPY GRHLSHDQQQ
LVDTLVEQLT ATLALDRHQE RQQQLIVMEE RATIARELHD SIAQSLSCMK MQVSCLQMQG
DVLPESSREL LSQIRNELNC SWAQLRELLT TFRLQLTEPG LRPALEASCQ EFSARFGFTV
KLDYQLPPRL VPSHQAIHLL QIAREALSNA LKHSHADDVV VTVTQCGKQV KLKVQDNGCG
VPENAERSNH YGMIIMRDRA QSLRGDCQVR RRETGGTEVT VTFIPETNFT ETQGDTHE