Gene SeHA_C1922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1922 
Symbol 
ID6490780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand- 
Start bp1875703 
End bp1876341 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content53% 
IMG OID642742133 
Productouter membrane protein W 
Protein accessionYP_002045778 
Protein GI194451270 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0854242 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.00107444 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAAT TTACAGTGGC GGCACTGGCG TTAACAACTC TTCTCTCAGG CAGCGCTTTC 
GCGCACGAAG CCGGAGAATT CTTTATGCGT GCAGGTCCGG CAACCGTCAG ACCTACAGAA 
GGGGCGGGTG GTACGCTGGG GCATTTAAAC GGGTTTGATG TGAGTAATAA CACGCAACTC 
GGCCTGACAT TCACTTACAT GGCGACGGAC AATATCGGGG TTGAATTGCT GGCGGCCACG 
CCGTTCCGCC ATAAGGTGGG TACGGGCGCG ACGGGAGATA TCGCCACGGT TCACCTGTTA 
CCGCCAACGT TAATGGCGCA GTGGTACTTC GGCGATTCCA GCAGCAAAGT GCGTCCTTAT 
GTCGGCGTGG GGGTGAACTA CACCACCTTC TTCGATAACG GCTTTAACGA TAATGGTAAA 
AACGCCGGGC TGTCCGATCT GAGCTTTAAG GATTCCTGGG GCGCGGCAGG GCAAGTTGGG 
GTAGATTACC TGATTAACCG CGACTGGTTA ATTGGCGCCT CTGTCTGGTA CATGGATATT 
GATACTACCG CCAATTATAA AATGGGCGGC GTTCAGCATC ATGACAGCGT GCGTCTGGAC 
CCATGGGTAT TTATGTTCTC GGCAGGCTAT CGTTTCTAA
 
Protein sequence
MKKFTVAALA LTTLLSGSAF AHEAGEFFMR AGPATVRPTE GAGGTLGHLN GFDVSNNTQL 
GLTFTYMATD NIGVELLAAT PFRHKVGTGA TGDIATVHLL PPTLMAQWYF GDSSSKVRPY 
VGVGVNYTTF FDNGFNDNGK NAGLSDLSFK DSWGAAGQVG VDYLINRDWL IGASVWYMDI 
DTTANYKMGG VQHHDSVRLD PWVFMFSAGY RF