Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C1916 |
Symbol | trpB |
ID | 6488279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 1870890 |
End bp | 1872083 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642742127 |
Product | tryptophan synthase subunit beta |
Protein accession | YP_002045772 |
Protein GI | 194451498 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0133] Tryptophan synthase beta chain |
TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.000000988826 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACAACAC TTCTCAACCC CTACTTTGGT GAATTCGGCG GCATGTATGT GCCGCAGATC CTGATGCCTG CGCTGAACCA GCTTGAAGAG GCCTTCGTCA GCGCGCAAAA AGATCCTGAA TTTCAGGCGC AATTCGCCGA TCTGCTAAAA AACTACGCAG GACGCCCCAC CGCACTGACG AAATGCCAGA ACATTACCGC CGGTACGCGT ACCACGTTGT ATTTAAAGCG CGAAGATTTA CTGCACGGCG GCGCGCACAA AACCAATCAG GTACTGGGTC AGGCGCTGCT GGCCAAACGG ATGGGGAAAA GCGAGATTAT CGCTGAAACC GGCGCCGGTC AGCACGGCGT CGCCTCTGCG CTCGCCAGCG CCCTGCTGGG TCTGAAATGC CGTATTTATA TGGGCGCCAA AGACGTTGAG CGCCAGTCGC CGAACGTCTT CCGTATGCGT CTGATGGGCG CTGAGGTCAT CCCGGTTCAT AGCGGCTCCG CTACGCTAAA AGATGCCTGT AACGAGGCGC TGCGCGACTG GTCCGGTAGT TACGAAACCG CGCACTATAT GCTCGGCACG GCGGCAGGAC CGCATCCCTA TCCCACCATC GTTCGCGAGT TCCAGCGCAT GATTGGCGAA GAGACGAAAG CGCAAATCCT CGACAAAGAG GGCCGTCTGC CAGATGCCGT TATCGCTTGC GTCGGTGGCG GCTCAAACGC TATCGGGATG TTTGCCGATT TTATTAATGA TACCAGCGTC GGGCTAATAG GCGTTGAACC TGGCGGTCAC GGTATTGAAA CCGGCGAGCA TGGCGCGCCG CTTAAACATG GTCGCGTTGG CATCTATTTC GGGATGAAAG CGCCGATGAT GCAAACAGCG GACGGGCAAA TTGAAGAGTC ATATTCCATT TCCGCCGGGC TCGATTTCCC ATCCGTTGGG CCGCAACATG CGTACCTGAA CAGCATCGGA CGCGCGGATT ATGTCTCCAT TACCGATGAT GAGGCGCTGG AAGCCTTCAA AACGTTGTGC CGCCATGAGG GAATTATCCC GGCGCTGGAA TCCTCCCACG CGTTGGCGCA CGCTCTGAAA ATGATGCGCG AGCAGCCGGA AAAAGAGCAA CTGCTGGTGG TCAATCTCTC TGGCCGCGGA GATAAAGACA TCTTTACCGT ACACGATATC CTGAAAGCGC GAGGGGAAAT CTGA
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Protein sequence | MTTLLNPYFG EFGGMYVPQI LMPALNQLEE AFVSAQKDPE FQAQFADLLK NYAGRPTALT KCQNITAGTR TTLYLKREDL LHGGAHKTNQ VLGQALLAKR MGKSEIIAET GAGQHGVASA LASALLGLKC RIYMGAKDVE RQSPNVFRMR LMGAEVIPVH SGSATLKDAC NEALRDWSGS YETAHYMLGT AAGPHPYPTI VREFQRMIGE ETKAQILDKE GRLPDAVIAC VGGGSNAIGM FADFINDTSV GLIGVEPGGH GIETGEHGAP LKHGRVGIYF GMKAPMMQTA DGQIEESYSI SAGLDFPSVG PQHAYLNSIG RADYVSITDD EALEAFKTLC RHEGIIPALE SSHALAHALK MMREQPEKEQ LLVVNLSGRG DKDIFTVHDI LKARGEI
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