| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C1907 |
|---|
| Symbol | |
|---|
| ID | 6491947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | + |
|---|
| Start bp | 1862180 |
|---|
| End bp | 1862941 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642742119 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_002045764 |
|---|
| Protein GI | 194448259 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.000000000000106494 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCATTACC AACCGAAACA AGATCTATTG CAAAACCGCA TTATTCTGGT CACTGGCGCC
AGCGATGGCA TTGGGCGGGA AGCCGCGCTT ACGTATGCGC GTTACGGCGC AACGGTGATT
CTGCTGGGAC GTAACGAAGA GAAACTGCGT CGGGTCGCGC AGCACATTGC TGACGAGCAA
CATGTCCAAC CACAGTGGTT TACGCTCGAT CTGCTGACCT GCACCGCTGA AGAGTGCCGG
CAAGTGGCCG ACCGCATCGC CGCACACTAT CCCCGCCTGG ATGGCGTCCT GCACAATGCC
GGGTTACTGG GGGAAATCGG TCCAATGAGC GAACAAGATC CGCAGATCTG GCAGGATGTC
ATGCAGGTAA ACGTTAACGC CACCTTTATG CTCACCCAGG CGCTGTTACC GTTATTGCTG
AAGTCCGATG CCGGCTCGCT GGTCTTTACG TCATCAAGCG TTGGCCGTCA GGGACGCGCC
AACTGGGGCG CCTATGCCAC CTCGAAGTTT GCTACTGAAG GAATGATGCA GGTGCTGGCG
GACGAATACC AGAACCGTTC TCTGCGTGTT AACTGCATTA ACCCGGGCGG CACGCGCACC
AGTATGCGCG CCAGCGCCTT TCCGACGGAA GATCCACAGA AATTAAAAAC GCCTGCCGAT
ATTATGCCGC TCTACCTGTG GCTTATGGGC GACGACAGTC GCCGTAAAAC CGGTATGACC
TTTGACGCCC AACCGGGCCG TAAACCAGGA ATCGCCCAAT GA
|
|---|
| Protein sequence | MHYQPKQDLL QNRIILVTGA SDGIGREAAL TYARYGATVI LLGRNEEKLR RVAQHIADEQ
HVQPQWFTLD LLTCTAEECR QVADRIAAHY PRLDGVLHNA GLLGEIGPMS EQDPQIWQDV
MQVNVNATFM LTQALLPLLL KSDAGSLVFT SSSVGRQGRA NWGAYATSKF ATEGMMQVLA
DEYQNRSLRV NCINPGGTRT SMRASAFPTE DPQKLKTPAD IMPLYLWLMG DDSRRKTGMT
FDAQPGRKPG IAQ
|
|---|
| |