Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C1898 |
Symbol | ribA |
ID | 6488951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 1851833 |
End bp | 1852510 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642742110 |
Product | GTP cyclohydrolase II |
Protein accession | YP_002045755 |
Protein GI | 194448093 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0807] GTP cyclohydrolase II |
TIGRFAM ID | [TIGR00505] GTP cyclohydrolase II |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.19727 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 5.04107e-18 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGATGACCG CTGCCTTATG GCAAAATAGC GGGATACAGG CCAACAGGCG ACGACACCGC AGGCGTCAGC ATAATCTGGA GAAATACATG CAGCTTAAAC GTGTGGCAGA AGCCAAACTG CCAACCCCAT TGGGTGACTT TCTGATGGTG GGATTTGAAG AACTGGCAAC CGGACACGAC CATGCCGCGC TGGTTTTTGG CGATATTTCA GGTAAAACGC CAGTGCTGGC TCGCGTTCAT TCCGAATGTC TTACCGGGGA CGCGCTTTTT AGTCTGCGCT GTGACTGTGG TTTTCAACTG GAAGCCGCGC TGACGCATAT TGCGGAAGAA GGACGCGGTA TTCTGATTTA CCACCGTCAG GAAGGCCGCA ATATCGGCCT GCTTAATAAA ATTCGCGCTT ATGCGTTACA GGATCAAGGC TATGACACGG TGGAGGCCAA TCATCAGCTC GGCTTTGCCG CCGATGAGCG TGATTTCACC CTGTGCGCGG ATATGTTCAA ATTACTGGGC GTGGATGAAG TTCGCCTGCT GACCAATAAT CCGAAGAAAG TCGAAATACT GACCGAGGCG GGAATTAATA TCGTGGAACG CGTTCCGCTC ATTGTGGGTC GTAATCCAAA TAATGAGCAT TATCTCGATA CTAAAGCGGC CAAAATGGGC CACCTGCTAA GCAAGTAA
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Protein sequence | MMTAALWQNS GIQANRRRHR RRQHNLEKYM QLKRVAEAKL PTPLGDFLMV GFEELATGHD HAALVFGDIS GKTPVLARVH SECLTGDALF SLRCDCGFQL EAALTHIAEE GRGILIYHRQ EGRNIGLLNK IRAYALQDQG YDTVEANHQL GFAADERDFT LCADMFKLLG VDEVRLLTNN PKKVEILTEA GINIVERVPL IVGRNPNNEH YLDTKAAKMG HLLSK
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