Gene SeHA_C1874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1874 
SymbolpspC 
ID6487828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1828917 
End bp1829276 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content52% 
IMG OID642742087 
ProductDNA-binding transcriptional activator PspC 
Protein accessionYP_002045732 
Protein GI194451320 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1983] Putative stress-responsive transcriptional regulator 
TIGRFAM ID[TIGR02978] phage shock protein C 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.0102012 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGGAA TCAATCTGAA TAAAAAACTA TGGCGTATGC CGCAAAAGGG CATGGTGCGT 
GGCGTTTGCG CCGGGATCGC CGACTACCTT GATGTACCGG TAAAACTGGT GCGTATTCTG
GTCGTGCTGT CGATTTTCTT TGGGCTGGCG TTTTTTACCG TAGTGGCCTA TATCGTTCTG
TCTTTTGTAC TGGACCCTAT GCCGGATAAT CTGGCCGCAG GCAAACCGCA GCCGACCAGC
GGCGAACTGC TGGATACCGT AGACAGAGAG CTTGCCGCAG GCGAAAAGCG TTTGCGAGAA
ATGGAACGCT ACGTCACGTC AGATACGTTC ACACTGCGTA GTCGTTTCCG TCAACTTTAA
 
Protein sequence
MGGINLNKKL WRMPQKGMVR GVCAGIADYL DVPVKLVRIL VVLSIFFGLA FFTVVAYIVL 
SFVLDPMPDN LAAGKPQPTS GELLDTVDRE LAAGEKRLRE MERYVTSDTF TLRSRFRQL