Gene SeHA_C1870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1870 
Symbol 
ID6491118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1825682 
End bp1826743 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content57% 
IMG OID642742083 
Producthypothetical protein 
Protein accessionYP_002045728 
Protein GI194450007 
COG category[S] Function unknown 
COG ID[COG3768] Predicted membrane protein 
TIGRFAM ID[TIGR01620] conserved hypothetical protein, TIGR01620 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.0539335 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAC CGTTAAAACC GCGTATTGAT TTTGCAGAAC CGCTAAAGGA GGAGTCTACG 
TCGGCCTTCA AAGCGCAGCA AACTTTCAGC GAAGCGGAGT CGCGTACATT TGCGCCTGCA
GCTATCGATG AGCGCCCGGA AGACGAAGGC GCGGCAGAAG CGGCGGTCGA TGCCGCGCTG
CGCCCCAAAC GCAGCCTGTG GCGTAAAATG GTGATGGGAG GACTGGCGCT GTTTGGCGCG
AGCGTGGTCG GGCAAGGCGT ACAGTGGACA ATGAATGCCT GGCAAACTCA GGACTGGGTC
GCTTTAGGCG GCTGTGCCGC AGGCGCGCTG ATCATTGGCG CTGGCGTGGG ATCGGTGGTC
ACGGAGTGGC GGCGATTATG GCGCTTGCGC CAGCGGGCGC ATGAACGCGA TGAAGCGCGT
GAACTGTTAC ATAGCCATAG CGTCGGGAAA GGTCGCGCAT TTTGCGAAAA ACTGGCGCAG
CAGGCGGGGA TTGATCAATC ACATCCGGCA TTACAACGTT GGTATGCCGC TATTCACGAA
ACGCAAAACG ACAGGGAAAT CGTCGGTTTG TATGCGAATC TGGTACAGCC GGTACTTGAC
GCGCAGGCGC GACGTGAGAT TAGCCGTTTC GCCGCGGAAT CGACTCTGAT GATCGCCGTC
AGCCCGTTAG CGTTGGTGGA TATGGCGTTT ATTGCCTGGC GTAATTTACG CCTGATTAAC
CGCATCGCAA CGCTGTATGG CATTGAACTT GGTTATTACA GCCGCCTTCG TCTGTTCCGT
CTGGTGTTGC TGAATATCGC GTTTGCGGGA GCCAGTGAGC TGGTGCGTGA AGTCGGTATG
GACTGGATGT CTCAGGATCT GGCCGCACGC TTGTCCACGC GTGCGGCGCA GGGGATTGGC
GCAGGTCTCC TTACCGCTCG ACTGGGAATA AAAGCGATGG AGCTATGTCG ACCATTGCCG
TGGATCGATA ACGATAAACC ACGTCTCGGT GATTTTCGTC GTCAGCTTAT CGGTCAGCTA
AAAGAGACGC TGCAAAAGAG TAAGTCGTCG CCTGAGAAAT GA
 
Protein sequence
MSEPLKPRID FAEPLKEEST SAFKAQQTFS EAESRTFAPA AIDERPEDEG AAEAAVDAAL 
RPKRSLWRKM VMGGLALFGA SVVGQGVQWT MNAWQTQDWV ALGGCAAGAL IIGAGVGSVV
TEWRRLWRLR QRAHERDEAR ELLHSHSVGK GRAFCEKLAQ QAGIDQSHPA LQRWYAAIHE
TQNDREIVGL YANLVQPVLD AQARREISRF AAESTLMIAV SPLALVDMAF IAWRNLRLIN
RIATLYGIEL GYYSRLRLFR LVLLNIAFAG ASELVREVGM DWMSQDLAAR LSTRAAQGIG
AGLLTARLGI KAMELCRPLP WIDNDKPRLG DFRRQLIGQL KETLQKSKSS PEK