Gene SeHA_C1863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1863 
Symbol 
ID6489187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand- 
Start bp1817760 
End bp1818665 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content55% 
IMG OID642742076 
Productregulatory protein LysR 
Protein accessionYP_002045721 
Protein GI194447330 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.508971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAGC TGGAAGCGAT GCAGGTCTAT GTTTGCGTGG TGGATACCCA TAGTTTTATC 
AGAGCCGCCG AAGTGCTGGG CGTGCCGCGC TCAACGGTAT CGCGAGTGGT TAAAGAACTG 
GAATCCTGGC TTAAGATTCA ACTTTTGCAA CGTACAACTC GCAAACTTAG TGTGACCGCA 
GAGGGGCGGC GTTACTACGA AGAGTGCAAA AGAGTGCTGG CAGATATCGC GGCCATGGAG 
TCGTCATTTC CCGGCCGGGC GGCACAACCC AAAGGGCGTT TTAAAGTGGG GATGCCGCAA 
TCTCTCGCCC GACATTGCAT TATTCCCACG CTCCCGGCCT TTTTGCGCCA GTATCCGGAG 
CTGGAGCTGA TACTTTGTTC CAGCGATAGC GTGGAGGATA TTATCCTGCA AGGGTATGAC 
TGCGTGATTC GGGCCGGCAG GATCGATGAT TCCACCACGC TGGTTTCCCG TCCACTTGCC 
AGCTTTAACT GGGTGATAGC AGCATCGCCC ACTTACATTG AGCGTTACGG TAGCCCTGAA 
AATTTAGATG ATCTGCAAAA GCACCATGCG GTCGGCTACC TGAACCACCG CACCGGGCGT 
ACCACCGACT GGTTTTTTAC GCGTGAAGGG AAGGATTACG CGATGCGGGT GCAGGAGACG 
CTGGTTGTCG ATGATACGGA CGCTTATATT CAGGCCGGAA TACAGGGACT GGGGTTAATT 
CGCGTCGCCA GCTATCTGGT TGCGCCGTAT CTGCACAGCG GGGCGCTGGT GACCTGCATG 
GACAACCATT ATTACGATTT GCCGCTTGCG CTGGTCTATC CGCAAAACAG GTTTCTGCCG 
CCTGCGGTAC GCGCTTTTTA TGACTGGTGC AAAACGGCGC TGAGCCAGCC GGAGCCTCTT 
CGCTAA
 
Protein sequence
MDKLEAMQVY VCVVDTHSFI RAAEVLGVPR STVSRVVKEL ESWLKIQLLQ RTTRKLSVTA 
EGRRYYEECK RVLADIAAME SSFPGRAAQP KGRFKVGMPQ SLARHCIIPT LPAFLRQYPE 
LELILCSSDS VEDIILQGYD CVIRAGRIDD STTLVSRPLA SFNWVIAASP TYIERYGSPE 
NLDDLQKHHA VGYLNHRTGR TTDWFFTREG KDYAMRVQET LVVDDTDAYI QAGIQGLGLI 
RVASYLVAPY LHSGALVTCM DNHYYDLPLA LVYPQNRFLP PAVRAFYDWC KTALSQPEPL 
R