Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C1821 |
Symbol | hrpA |
ID | 6489708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 1779437 |
End bp | 1783357 |
Gene Length | 3921 bp |
Protein Length | 1306 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642742036 |
Product | ATP-dependent RNA helicase HrpA |
Protein accession | YP_002045681 |
Protein GI | 194450723 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1643] HrpA-like helicases |
TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCCCA AGAGCTTTAT GACTGAACAA TCTACGTTGA CGCTTCAGGT GTTACAGCAG CGGCTGGATG CACTGATGCT GCGCGACAAA CAGCGCTTTG CGCGCCGCCT GCATGGCGTA AAGAAAGTAA AAAATCCTGA TGCGCAACAG GCCATTTTCC AGACGATGGC GAAAGAAATT GAACAGGCTG CGGCGCAAGT CGCCCTCCGC GAAGCGGCGC GCCCCTCAAT CACTTATCCG CAAAATCTGC CTGTTAGCCA GAAGAAACAG GACATTCTGG AAGCGGTCCG CGATCATCAG GTAGTGATCG TGGCAGGGGA AACCGGTTCC GGTAAAACCA CCCAGTTGCC GAAAATTTGT ATGGAGCTGG GACGCGGAAT TAAAGGACTT ATTGGACATA CTCAGCCGCG TCGCCTGGCG GCGCGCACCG TTGCTAACCG CATTGCCGAA GAGTTGCAAA CGGAGCCTGG CGGCTGCATC GGCTATAAAG TTCGTTTCAG CGATCATGTC AGTAGCAACA CCATGGTCAA ACTGATGACG GACGGTATCC TGCTGGCGGA AATCCAGCAG GACAGACTAT TGATGCAGTA TGACACCATC ATTATTGATG AAGCGCATGA ACGCAGCCTG AATATTGACT TCTTGCTCGG CTATCTGAAA GAGCTTCTGC CGCGTCGCCC CGATCTGAAA GTGATTATTA CCTCTGCGAC CATCGACCCG GAACGCTTCT CGCGCCACTT TAATAACGCG CCGATTATCG AAGTCTCTGG CCGAACGTAT CCCGTAGAGG TTCGTTATCG CCCCATCGTG GAAGAGGCTG ACGACACTGA ACGCGATCAG CTACAGGCAA TTTTCGACGC TGTTGATGAA CTGGGGCGTG AAAGTCCCGG CGATATCCTG ATTTTTATGA GCGGAGAGCG GGAAATCCGC GATACCGCCG AAGCCCTGAA CAAGCTGAAC TTACGGCATA CCGAAGTGTT GCCGCTGTAT GCACGCTTGT CGAACAGCGA ACAGAACCGC GTTTTCCAGT CGCACAGCGG ACGCCGTATC GTGCTGGCGA CTAACGTGGC GGAAACCTCG CTGACGGTGC CGGGTATCAA GTATGTGATC GATCCTGGCA CTGCGCGCAT CAGCCGCTAC AGCTACCGCA CTAAAGTGCA GCGCCTGCCG ATTGAACCGA TCTCACAGGC TTCCGCCAAC CAGCGTAAAG GGCGTTGCGG ACGCGTATCG GAAGGGATTT GCATTCGTCT GTATTCGGAA GATGACTTTT TGTCACGTCC GGAATTTACC GACCCGGAAA TTCTACGTAC CAACCTGGCG TCGGTTATTT TGCAGATGAC CGCCCTGGGG CTGGGTGACA TTGCCGCCTT CCCGTTTGTC GAAGCGCCGG ATAAGCGCAA TATTCAGGAT GGCGTGCGTT TGTTGGAAGA GCTGGGGGCG ATTACCGCCG ACGAACAGCA AACGGCATAT AAGCTGACGC CACTGGGCCG ACAATTATCC CAGTTGCCGG TCGACCCGCG CCTGGCGCGT ATGGTTCTGG AAGCGCAAAA ACATGGCTGT GTGCGCGAAG CGATGATCAT TACTTCCGCA CTCTCTATTC AGGATCCGCG CGAGCGCCCA GTGGATAAGC AGCAGGCTTC CGATGAGAAA CACCGGCGCT TCCATGATAA GGAGTCCGAT TTTCTGGCGT TTGTTAACCT GTGGAATTAC CTCGGCGAGC AACAAAAGGC CCTGTCGTCG AATCAATTCC GCCGTCTGTG TCGCACCGAC TATCTGAACT ATTTACGCGT GCGTGAGTGG CAGGATATCT ATACCCAACT GCGTCAGGTG GTAAAAGAAC TGGGGATTCC GGTAAACAGC GAACCCGCAG AGTACCGGGA AATTCACGTT GCGTTGTTAA CGGGACTGTT GTCGCATATC GGGATGAAAG ATGCCGATAA ACAAGAGTAC ACCGGCGCGC GTAACGCCCG ATTCTCTATT TTCCCCGGTT CCGGTTTATT CAAAAAACCG CCGAAATGGA CAATGGTCGC AGAACTGGTG GAGACCAGCC GTTTGTGGGG GCGCATCGCT GCCCGCATTG AGCCAGAATG GGTGGAACCG GTAGCCCAGC ACCTGATTAA ACGTTCATAT AGCGAACCGC ACTGGGAGCG GGCGCAAGGC GCGGTGATGG CGACGGAAAA GGTTACTGTC TACGGTCTGC CGATTGTCGC CGCGCGCAAA GTGAATTACA GCCAGATTGA CCCGGCGTTG TGTCGCGAGT TGTTCATCCG CCATGCGCTG GTGGAGGGGG ACTGGCAAAC CCGTCATGCC TTCTTCCGTG AGAATCTAAA ATTGCGTGCG GAAGTCGAGG AACTTGAGCA CAAATCTCGC CGCCGCGATA TCCTGGTGGA TGACGATACC CTGTTTGAGT TTTATGACCA GCGTATTAGC CATGACGTTA TTTCCGCCCG CCACTTTGAT AGTTGGTGGA AAAAAATCAG CCGCGAGACG CCGGATCTGC TCAACTTTGA AAAAAGTATG CTGATTAAAG AAGGCGCGGA AAAAATCAGC AAACTGGATT ACCCGAATTT CTGGCACCAG GGCAATCTCA AGCTGCGTTT GAGCTATCAG TTTGAACCGG GCGCGGATGC TGACGGCGTG ACCGTCCATA TTCCGTTGCC GCTACTTAAC CAGGTTGACG AGAGCGGTTT TGAATGGCAG ATCCCGGGGC TGCGCCGTGA ATTAGTTATT GCGCTGATTA AATCGTTGCC AAAACCGGTA CGTCGCAACT TTGTTCCGGC GCCAAACTAT GCTGAAGCGT TTTTAGGTCG CGTAACGCCG CTGGAGCTGC CGCTGCTGGA CGCTCTGGAG CGTGAACTGC GCCGGATGAC CGGCGTCACG GTCGATCGGG AAGACTGGCA TTGGGATCAG GTGCCCGAGC ATCTGAAAAT CACGTTTCGC GTGGTGAATG ACAAAAACAA GAAACTGCAG GAAGGGCGTT CGCTCGCCGA GCTTAAAAAT GCGCTGAAAG GCAAAGTGCA GGAGACGCTC TCGGCGGTGG CGGATGACGG CATCGAGCAG AGCGGGCTGC ATATCTGGAG TTTCGGCGAG CTGCCGGAAA GCTACGAACA GAAACGCGGT AATTATAAAG TGAAGGCGTG GCCGGCGTTA GTGGATGAGC GTGACAGCGT CGCTATCAAA TTGTTTGATA ATCCGCTGGA ACAACAACAG GCGATGTGGT GCGGTTTACG CCGTCTGCTG TTGCTCAATA TTCCTTCACC GATTAAGTAT CTGCATGAGA AATTGCCGAA TAAAGCCAAG CTGGGGCTGT ACTTTAACCC GTACGGCAAA GTACTGGAGT TGATTGATGA CTGTATCGCC TGCGGGGTAG ATAAGCTGAT AGATGCCAAC GGCGGACCGG TGTGGAACGA AGCAGGTTTC ACCGCGCTGC ACGAAAAGGT ACGCGCCGAG CTGAATGATA CTGTGGTGGA TATCGCGAAG CAGGTTGAGC GGATCCTGAC GACCGTATTC AATATCAATA AGCGTCTGAA AGGGCGGGTG GATATGAGCA TGGCGTTGGG GCTTTCCGAT ATCAAGGCGC AGATGAGCGG TCTGGTATAC CGTGGTTTTG TGACTGGCAA CGGCTTTAAA CGTCTCGGCG ATACGCTGCG TTATCTGCAG GCAATTGAAA AGCGGCTGGA GAAACTGGCT GTCGATCCGC ACCGCGATCG GGCGCAAATG CTGAAAGTCG AAAGCGTCCA GCAGGCGTGG CAACAATGGA TAAATAAACT GCCTCCAGCG CGTCGCGAAG ATGATGATGT TAAAGAGATC CGTTGGATGA TTGAAGAACT GCGTGTCAGT TATTTCGCCC AACAGCTCGG TACGCCTTAT CCTATTTCCG ATAAGCGTAT TTTACAGGCC ATGGATCAGA TTACGGCCTA A
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Protein sequence | MLPKSFMTEQ STLTLQVLQQ RLDALMLRDK QRFARRLHGV KKVKNPDAQQ AIFQTMAKEI EQAAAQVALR EAARPSITYP QNLPVSQKKQ DILEAVRDHQ VVIVAGETGS GKTTQLPKIC MELGRGIKGL IGHTQPRRLA ARTVANRIAE ELQTEPGGCI GYKVRFSDHV SSNTMVKLMT DGILLAEIQQ DRLLMQYDTI IIDEAHERSL NIDFLLGYLK ELLPRRPDLK VIITSATIDP ERFSRHFNNA PIIEVSGRTY PVEVRYRPIV EEADDTERDQ LQAIFDAVDE LGRESPGDIL IFMSGEREIR DTAEALNKLN LRHTEVLPLY ARLSNSEQNR VFQSHSGRRI VLATNVAETS LTVPGIKYVI DPGTARISRY SYRTKVQRLP IEPISQASAN QRKGRCGRVS EGICIRLYSE DDFLSRPEFT DPEILRTNLA SVILQMTALG LGDIAAFPFV EAPDKRNIQD GVRLLEELGA ITADEQQTAY KLTPLGRQLS QLPVDPRLAR MVLEAQKHGC VREAMIITSA LSIQDPRERP VDKQQASDEK HRRFHDKESD FLAFVNLWNY LGEQQKALSS NQFRRLCRTD YLNYLRVREW QDIYTQLRQV VKELGIPVNS EPAEYREIHV ALLTGLLSHI GMKDADKQEY TGARNARFSI FPGSGLFKKP PKWTMVAELV ETSRLWGRIA ARIEPEWVEP VAQHLIKRSY SEPHWERAQG AVMATEKVTV YGLPIVAARK VNYSQIDPAL CRELFIRHAL VEGDWQTRHA FFRENLKLRA EVEELEHKSR RRDILVDDDT LFEFYDQRIS HDVISARHFD SWWKKISRET PDLLNFEKSM LIKEGAEKIS KLDYPNFWHQ GNLKLRLSYQ FEPGADADGV TVHIPLPLLN QVDESGFEWQ IPGLRRELVI ALIKSLPKPV RRNFVPAPNY AEAFLGRVTP LELPLLDALE RELRRMTGVT VDREDWHWDQ VPEHLKITFR VVNDKNKKLQ EGRSLAELKN ALKGKVQETL SAVADDGIEQ SGLHIWSFGE LPESYEQKRG NYKVKAWPAL VDERDSVAIK LFDNPLEQQQ AMWCGLRRLL LLNIPSPIKY LHEKLPNKAK LGLYFNPYGK VLELIDDCIA CGVDKLIDAN GGPVWNEAGF TALHEKVRAE LNDTVVDIAK QVERILTTVF NINKRLKGRV DMSMALGLSD IKAQMSGLVY RGFVTGNGFK RLGDTLRYLQ AIEKRLEKLA VDPHRDRAQM LKVESVQQAW QQWINKLPPA RREDDDVKEI RWMIEELRVS YFAQQLGTPY PISDKRILQA MDQITA
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