Gene SeHA_C1780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1780 
SymbolsifB 
ID6489033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp1740266 
End bp1741216 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content38% 
IMG OID642741997 
Productsecreted effector protein 
Protein accessionYP_002045642 
Protein GI194451488 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones96 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAATTA CTATCGGGAG AGGATTTTTA AAGAGTGAGA TGTTTTCTCA AAGTGCTATC 
TCTCAACGCT CCTTCTTTAC GTTACTATGG GAAAGGATTA AAGATTTTTT TTGTGACACG 
CAAAGATCCA CTGCCGATCA ATATATAAAG GAATTATGTG ATGTTGCCTC TCCGCCTGAC 
GCGCAACGTT TATTTGATTT ATTTTGCGCG TTATATGAAT TATCATCTCC ATCATGCAGA 
GGAAATTTCC ATTTTCAGCA CTATAAAGAT GCTGAGTGTC AATATACAAA TCTCTTTATT 
AAAGATGGCG AAGATATTCC GTTATGCATT GTGATACGTC AGGATCACTA CTATTATGAT 
ATAATGAATA GAACAGTGCT CTGTGTTGAT ACTCAGCCTG CCCACCTGAA AAGATATTCT 
GATATTACTA TAAAAGCTAG CACTTATGTT TGTGAAGAGC TATGTTGCTT GTTCCCTGAG 
CGGTTACTAC TCTCGCTATC CGGCGGTATA ACATTTCCCG TTGACCTAAA AAATATAAAA 
GAGACGCTTA TCGCCATGGC AGAAAAGGGT AATTTATGTG ACTGGAAGGA ACAGGAAAGA 
AAAGCCGCCA TCTCCTCTAG GATTAATCTG GGCATTGCCC AGGCAGATGT ACCACCTATT 
GACGACGCTA TCAAAAACAA AATAGCCGCA AAGGTTATTG AGAATACTAA CTTAACGAAT 
GCAACATTTG AACCAAATTA TGTACAAAGC TCAGTTACTC AAATTGTTTA TTCATGTTTG 
TTTAAGAATG AGATACTAAT GAATATGCTG GAAGAAAGTT CCTCTCATGG CCTGCTATGT 
TTAAACGACC TTGCTGAATA TGTAGCGCTA CAAGTTCATA ACAGCCTTTT TTCTGAAGAT 
TTATCTTCAC TCGTTGAAAC AACAAAAAAT GAGGCTCATT ACCAGAGTTG A
 
Protein sequence
MPITIGRGFL KSEMFSQSAI SQRSFFTLLW ERIKDFFCDT QRSTADQYIK ELCDVASPPD 
AQRLFDLFCA LYELSSPSCR GNFHFQHYKD AECQYTNLFI KDGEDIPLCI VIRQDHYYYD 
IMNRTVLCVD TQPAHLKRYS DITIKASTYV CEELCCLFPE RLLLSLSGGI TFPVDLKNIK 
ETLIAMAEKG NLCDWKEQER KAAISSRINL GIAQADVPPI DDAIKNKIAA KVIENTNLTN 
ATFEPNYVQS SVTQIVYSCL FKNEILMNML EESSSHGLLC LNDLAEYVAL QVHNSLFSED 
LSSLVETTKN EAHYQS