Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C1777 |
Symbol | ydcW |
ID | 6492410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 1735680 |
End bp | 1737125 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642741994 |
Product | gamma-aminobutyraldehyde dehydrogenase |
Protein accession | YP_002045639 |
Protein GI | 194448762 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR03374] 1-pyrroline dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 92 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGATAT GGGAAAATGC TATGCAATAT CAATTACTGA TTAATGGCGT GCTGGTGGAC GGCGAGGGAG AAAGGCAGTC TGTTTATAAC CCGGCGACAG GCGAGGTCAT ACTTGAGATT GCGGAAGCGT CGCCCGCGCA GGTTGACGCC GCAGTGCTGG CCGCCGATAG CGCGTTTGCC GAATGGGGGC AGACCACACC CAAAGCACGG GCGGAATGTC TGTTAAAACT GGCGGACAGC ATCGAGCAAA ACGCCCTTGA GTTCGCCCGG CTTGAATCGC AAAACTGCGG TAAGCCTTTG CACTGCGTAA TTAATGATGA AATTCCGGCA ATCGTGGATG TCTTTCGCTT TTTTGCCGGC GCGGCCCGTT GTTTGAGTGG GCTGGCGGCG GGCGAATATC TGGAAGGACA TACGTCGATG ATCCGCCGGG ATCCGATTGG CGTGGTTGCC TCTATCGCGC CGTGGAATTA TCCGCTCATG ATGGCTGCCT GGAAGCTGGC GCCAGCGCTG GCGGCAGGTA ACTGCGTGGT GATTAAGCCT TCTGAAATCA CGCCGCTGAC GGCGCTTAAA CTTGCCGCGC TGGCGAAGGA TATCTTTCCG CCGGGGGTGC TCAATGTCCT GTTCGGACGA GGGCAAACTG TTGGTGATGT ATTGACCGGT CATGAAAAAG TACGCATGGT CTCTTTAACC GGTTCTATCG CGACCGGGGA GCATATTCTG CGCCATACTG CGCCAGCGAT AAAACGTACG CATATGGAAC TCGGTGGTAA AGCCCCGGTG ATTGTTTTTG ATGACGCCGA TCTGGATGCG GTGGCGCAGG GCGTCCGGAC TTTCGGTTTC TATAATGCCG GACAGGATTG TACTGCGGCG TGCCGTATAT ACGCGCAGCG CGGTATCTAT GATGCGCTGG TCGAAAAGCT AGGGAACGCG GTGAGCAGCC TGAAAATGGG CGCGCCGGAG GATGAGTCGA CAGAGCTGGG GCCGTTAAGT TCGCTGGCGC ACCTGAAGCG CGTCACAGCG GCTGTAGAGG AGGCGAAGGC CCTCAGCCAT ATCCGTGTGA TTACTGGTGG AAGTCAAACG GAAGGTAAAG GTTACTATTT CGCTCCGACG TTGCTGGCAG ACGCAAAACA GGAAGATGCC ATCGTGCAAC GCGAGGTCTT CGGCCCGGTG GTCAGTATAA CCGTCTTTGA TGATGAAGAT CAGGTTCTGA GGTGGGCCAA CGATTCTCAC TATGGTCTGG CATCCTCCGT CTGGACTCAG GACGTCGGGC GGGCGCACCG GCTTAGCGCC AGATTGCAGT ATGGCTGTAC CTGGATTAAT ACCCATTTCA TGTTGGTTAG CGAAATGCCG CATGGAGGGC AAAAACAGTC GGGATACGGC AAAGATATGT CATTGTATGG TCTGGAAGAC TACACCCTTG TCCGCCACAT CATGGTTAAG CATTAA
|
Protein sequence | MTIWENAMQY QLLINGVLVD GEGERQSVYN PATGEVILEI AEASPAQVDA AVLAADSAFA EWGQTTPKAR AECLLKLADS IEQNALEFAR LESQNCGKPL HCVINDEIPA IVDVFRFFAG AARCLSGLAA GEYLEGHTSM IRRDPIGVVA SIAPWNYPLM MAAWKLAPAL AAGNCVVIKP SEITPLTALK LAALAKDIFP PGVLNVLFGR GQTVGDVLTG HEKVRMVSLT GSIATGEHIL RHTAPAIKRT HMELGGKAPV IVFDDADLDA VAQGVRTFGF YNAGQDCTAA CRIYAQRGIY DALVEKLGNA VSSLKMGAPE DESTELGPLS SLAHLKRVTA AVEEAKALSH IRVITGGSQT EGKGYYFAPT LLADAKQEDA IVQREVFGPV VSITVFDDED QVLRWANDSH YGLASSVWTQ DVGRAHRLSA RLQYGCTWIN THFMLVSEMP HGGQKQSGYG KDMSLYGLED YTLVRHIMVK H
|
| |