Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C1735 |
Symbol | glgX |
ID | 6487707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 1684911 |
End bp | 1686986 |
Gene Length | 2076 bp |
Protein Length | 691 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642741954 |
Product | glycogen debranching enzyme GlgX |
Protein accession | YP_002045599 |
Protein GI | 194448869 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 81 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACAA ACAGGGCTTT TGAAATCAGA TCAGGATACA ACCATACGCT TGGCGCAAAT TATGACGGCG AAGGTGTGAA TTTCGCTATT TTTTCCGCCC ATGCGGAACG CGTCGAGCTT TGCCTTTACG ATCCGAGCGG GGAGCATGAA GTCGCTCGTC TGGAGTTACC GGAATATACC GACGAAATAT GGCACGGCTA TGTCCCGAAG TTGCAGCCCG GCGCGCTGTA TGGGTACCGC GTTTACGGTC CTTATAACCC GGAAAATGGT CATCGTTTTA ACCCCAATAA GCTGCTTATT GACCCTTATG CCCGTGAGCT GGTGGGCGAT ATTCAGTGGA ACGATGCGCA TTTCGCGTAT CAATTACTTC ATGACGATAA AGATTTGACC TTTGATGACC AGGATAGCGC GCCATTTACG CCTAAATGCC GGGTGATTGA TCCGGATGAG GCTAACTGGG AGGATAGACA ACGGCCTTCC ATACCGTGGT CGAACGCCAT TATTTATGAA ACGCATGTAA AAGGCTTTAC CCAGCTTAAT TCCGCGATCC CTGAGCCTCT ACGCGGTACG TTTGAAGGCA TGGGGCATAA AGCCAGCGTG GATTACATTA AAAGTCTGGG GATTACCTCC GTCGAGCTTT TACCCGTTCA CTGGTTCCCG GACGATCAGC ATCTGCTCGA TAAAGGACTG AAAAATTTCT GGGGATACAA CTCGCTGGGC TTTTTTGCGC CGGCGACGCG CTACTATGGT CCAAAAGGTA TTCAGGGATT CCGCGATATG GTGCGCGCTT TCCATGATGC CGGCGTCGAA GTGATACTGG ATGTGGTCTA TAACCATACG GCAGAAGGGA ATGAACTTGG TCCCACGCTG TCATTTAAAG GTATCGATAA CTTCTCTTAC TATCGCACCA TGCCCGATCA GCATCGCTAT TACATTAACG ATACAGGGAC AGGTAATACC GTCAATACCT CTCATCCACG GGTACTGCAA ATGGTGATGG ATTCCCTTCG CTATTGGGCG GAGTCAATGC ATGTCGACGG CTTTCGTTTT GATTTGGGCA CTATTCTTGG TCGTGAGCCG GAAGGCTTTG ATCAGAGAGG CGGTTTTTTT GATGCGGTAA CGCAAGACCC GGTGCTGGCA AAACTGAAAC TGATTGGCGA ACCCTGGGAT ATCGGACCGG GCGGCTATCA GGTTGGCGGC TTTCCACCAG GGTGGGGCGA ATGGAATGAT AAATACCGCG ATACGGTGCG CGAATACTGG AAAGGTGACA ACGTCACAAA TGATTTCGCC GCACGCCTGC TGGGTTCCGG CGATCTCTAT GATTTGCGCG GCCGTCGCCC CTGGTCAAGC GTTAACTTTA TTACTGCCCA TGACGGCTTC ACGCTGAACG ATCTGGTGTC TTATAACGAC AAACATAATG AAGCCAATGG CGAAGATAAT AATGACGGGC ATAATGATAA CCGCTCCTGT AACTATGGCG CAGAAGGGCC AACCGACGAC GAGGGCATCA ATGCGATACG CGAGCAACAA AAACGCAATT TCCTGACCAC CTTACTTTTC TCACACGGCA CGCCGATGTT ATTAGCGGGC GATGAGTTTG GCCGCAGTCA GATGGGCAAT AACAATGGCT ACTGTCAGGA CAGTGAAATA TCGTGGGTCC ACTGGGATAA TTTGCCGGAA ACCGCCAATG CGCTACGAGA GTTTACCCGT CATCTGATTC AACTGCGCGC CACGCAACCG TTGCTGCGCC GGGAGAGCTG GCGTGACGGT CTGGAGATCC GCTGGTTTAA CGCCGGCGGA GGGGCGCAGC AATCCGAACA ATGGGATGAG GGATCGACCA TAGGCGTATG CATTAGTCGA CCCGATCTAC AGCCGGAAGC GGGGATCTGG CATGACGCCT TACTGCTTTT CAATCCGTTT GAAGGCAGCG TACCGTTCCG TATTCCGATG TGGGGAGAAG GCGGCTGGGT ACTTGAACTG ACGACTGCCG ATAACGCGCA GCAGGGAATG CGGATTACCG AAGAAATGGA TTTCGATCTG GCCGGGCGCA GTATCGTGTT ATTCAGACGC CCCTGA
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Protein sequence | MTTNRAFEIR SGYNHTLGAN YDGEGVNFAI FSAHAERVEL CLYDPSGEHE VARLELPEYT DEIWHGYVPK LQPGALYGYR VYGPYNPENG HRFNPNKLLI DPYARELVGD IQWNDAHFAY QLLHDDKDLT FDDQDSAPFT PKCRVIDPDE ANWEDRQRPS IPWSNAIIYE THVKGFTQLN SAIPEPLRGT FEGMGHKASV DYIKSLGITS VELLPVHWFP DDQHLLDKGL KNFWGYNSLG FFAPATRYYG PKGIQGFRDM VRAFHDAGVE VILDVVYNHT AEGNELGPTL SFKGIDNFSY YRTMPDQHRY YINDTGTGNT VNTSHPRVLQ MVMDSLRYWA ESMHVDGFRF DLGTILGREP EGFDQRGGFF DAVTQDPVLA KLKLIGEPWD IGPGGYQVGG FPPGWGEWND KYRDTVREYW KGDNVTNDFA ARLLGSGDLY DLRGRRPWSS VNFITAHDGF TLNDLVSYND KHNEANGEDN NDGHNDNRSC NYGAEGPTDD EGINAIREQQ KRNFLTTLLF SHGTPMLLAG DEFGRSQMGN NNGYCQDSEI SWVHWDNLPE TANALREFTR HLIQLRATQP LLRRESWRDG LEIRWFNAGG GAQQSEQWDE GSTIGVCISR PDLQPEAGIW HDALLLFNPF EGSVPFRIPM WGEGGWVLEL TTADNAQQGM RITEEMDFDL AGRSIVLFRR P
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