Gene SeHA_C1710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1710 
Symbol 
ID6487662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1660928 
End bp1662031 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content52% 
IMG OID642741932 
Productuptake hydrogenase small subunit 
Protein accessionYP_002045577 
Protein GI194451874 
COG category[C] Energy production and conversion 
COG ID[COG1740] Ni,Fe-hydrogenase I small subunit 
TIGRFAM ID[TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACAC AAGATACATT TTATCAAGTT ATGCGTAGAC ACGGCGTGAC AAGGCGTAGC 
TTCCTCAAGT TTTGCAGCCT TACCGCAACG TCTTTAGGCC TGAGCAGTTC GATGATTCCT
CAGATAGCTT ATGCCCTGGA GAATAAACCG CGTACGCCAG TGATATGGCT GCATGGTCTT
GAATGTACCT GCTGTACCGA ATCTTTCATT CGCTCTGCGC ACCCGTTGGC AAAAGATGCC
ATTTTGTCGC TCATTTCCCT GGATTATGAC GACACCATTA TGGCCGCCGC AGGGCAACAA
GCCGAGCAGG CGTTGGCGGA TGTGATGCGC GAGTACAAAG GAAATTATAT CGTTGCCGTG
GAAGGTAACG CGCCGCTGAA TGAAGATGGG ATGTTTTGCA TACTGGCTGG CGAGCCGTTC
CTGGAGAAGT TAAAACGCGT CAGCGCGGAT GCTAAAGCGA TTATCGCCTG GGGGTCCTGC
GCATCATGGG GCTGCGTGCA GGCAGCCCGT CCCAACCCAA CTAAAGCCAC GCCGGTTCAC
AAATTAATTA CCGATAAACC CATTATTAAA GTGCCAGGCT GCCCGCCTAT ACCTGAAGTG
ATGTCCGCCG TTATCACCTA TATGCTGGCA TTTGATCGCA TCCCTCCCCT TGATCGTCTT
GGACGACCAA AAATGTTTTA TGGCCAGCGA ATTCATGACA AATGTTACCG ACGCGCGCAT
TTCGATGCCG GTCAGTTTGT GGAAGCGTGG GATGACGAAG GCGCCAGAAA AGGGTATTGC
CTTTACAAGA TGGGCTGTAA AGGCCCGACC ACCTATAACG CCTGTTCAAC CGTTCGCTGG
AATGATGGCG TGTCTTTTCC TATCCAGTCA GGTCATGGAT GCCTCGGATG TTCGGAAGAT
GGATTCTGGG ATTACGGTTC TTTTTACAGC CGGGCAACGG GCATTCCGCA AACCGGCATT
GAGGCTACCG CCGATAAAAT CGGACTGGGC GTTGCTGGCG TCGCGGGCGC TGCCGCCATC
GCTCACGCCA CGGTGAGCGC CATAAAACAT GCCCGCAATA AAAACAACAC GTCATCAGAA
AACGCTCCGG AAGAGAAAAA ATAA
 
Protein sequence
MQTQDTFYQV MRRHGVTRRS FLKFCSLTAT SLGLSSSMIP QIAYALENKP RTPVIWLHGL 
ECTCCTESFI RSAHPLAKDA ILSLISLDYD DTIMAAAGQQ AEQALADVMR EYKGNYIVAV
EGNAPLNEDG MFCILAGEPF LEKLKRVSAD AKAIIAWGSC ASWGCVQAAR PNPTKATPVH
KLITDKPIIK VPGCPPIPEV MSAVITYMLA FDRIPPLDRL GRPKMFYGQR IHDKCYRRAH
FDAGQFVEAW DDEGARKGYC LYKMGCKGPT TYNACSTVRW NDGVSFPIQS GHGCLGCSED
GFWDYGSFYS RATGIPQTGI EATADKIGLG VAGVAGAAAI AHATVSAIKH ARNKNNTSSE
NAPEEKK