Gene SeHA_C1701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1701 
Symbol 
ID6487641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1653553 
End bp1654671 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content46% 
IMG OID642741923 
Productouter membrane protein N 
Protein accessionYP_002045568 
Protein GI194448019 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG TAGTGGTGTT ATCTGCGGTA GCCGCAGCCG TGATGATGGC TGGAGCCGCC 
AACGCAGCAG AAATCTATAA CAAGGATGGC AATAAACTGG ATTTGTATGG CAAGGTCGAC
GGCCTGCATT ATTTTTCCAG TAATCATAGT ACGGATGGCG ATCAATCTTA TATCCGTATG
GGTATTAAAG GCGAGACTCA AATTACCGAT CAACTAACCG GTTTTGGACA GTGGGAGTAT
CAGGTCAACG CCAATCGTCC GGAAGATGGT GACTCCAGCG GTTCCCCGCA AAGCTGGACG
CGTCTCGGTT TTGCTGGTTT GGCATTTGCC GATATGGGGT CTGTTGACTA TGGTCGTAAC
TATGGCGTGT TATACGACAT TGGTTCATGG ACTGACGTAC TGCCTGAATT TGGTAATGAT
TCGTATGAAG CTTCCGATAA TTTTATGACC GGGCGCGCGA ATGGCGTTCT GACTTATCGC
AATAATGATT TCTTTGGTCT GGTTGATGGT CTGAATATTG CGTTGCAGTA TCAGGGTAAA
AATGACGGCC TGTCGAAAGA AGGCGATCCT TTAAGTAATA ATGCCAGAAA AAGTATCGCG
TACCAGAATG GCGATGGTTT CGGGGCATCA GCGACATATG ATTTGGGCAT GGGGGTGAGC
CTGGGGGCAG CCTATACCAG TTCCAAACGC ACGCTTGATC AGATGACGCA AGATAAATAC
GACAATGGTG ACCGCGCTGA AGCCTGGACT GGCGGCGTGA AGTATGATGC CAATAATATT
TACCTGGCGG CAAACTATAC CCGTACTTAT GATATGACCT ATATGGGCGA TACATTGGGC
GGCTTTGCAC ATAAAACCGA TAACTGGGAA ATGGTAGGGC AATATCAATT TGATAATGGC
TTACGCCCGT CACTGGCATT CCTGCAATCC AGAGCCAATG ATGTTGATGG ACTGGGTTCG
TTCGACCTTG TGAAATATAT TGATGTGGGT TCCTATTACT ACTTCAATAA AAATATGTCC
GCGTATGTTG ACTACAAAAT CAATCTGCTA AAAGATGGCA ACCCATCGAA TCCTAATACA
GACAACACCG TGGCGCTCGG CTTAGTCTAC GAGTTTTGA
 
Protein sequence
MKKVVVLSAV AAAVMMAGAA NAAEIYNKDG NKLDLYGKVD GLHYFSSNHS TDGDQSYIRM 
GIKGETQITD QLTGFGQWEY QVNANRPEDG DSSGSPQSWT RLGFAGLAFA DMGSVDYGRN
YGVLYDIGSW TDVLPEFGND SYEASDNFMT GRANGVLTYR NNDFFGLVDG LNIALQYQGK
NDGLSKEGDP LSNNARKSIA YQNGDGFGAS ATYDLGMGVS LGAAYTSSKR TLDQMTQDKY
DNGDRAEAWT GGVKYDANNI YLAANYTRTY DMTYMGDTLG GFAHKTDNWE MVGQYQFDNG
LRPSLAFLQS RANDVDGLGS FDLVKYIDVG SYYYFNKNMS AYVDYKINLL KDGNPSNPNT
DNTVALGLVY EF