Gene SeHA_C1677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1677 
Symbol 
ID6488699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1631725 
End bp1633065 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content51% 
IMG OID642741900 
Productinner membrane metabolite transport protein YdfJ 
Protein accessionYP_002045545 
Protein GI194451595 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID[TIGR00883] metabolite-proton symporter 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value0.905645 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGCTG CCGTATCTGG CTGGTTAGGC ACCGCGCTTG AATTTATGGA TTTTCAGTTA 
TATTCACTAG GCGCGGCTCT GGTCTTCCAT GAGATATTTT TTCCGGAACA GTCTGCCGCG
ATGGCGCTTA TTCTGGCAAT GGGCACCTAT GGTGCAGGTT ATATAGCCAG AATTATCGGC
GCCTTTGTTT TTGGTAAAAT GGGCGACCGA ATCGGACGAA AAAAAGTATT GTTTATTACC
ATCACCATGA TGGGGATCTG CACCACGCTG ATTGGCGTAC TGCCGACGTA TGCGCAAATC
GGCATTTTTG CGCCAGTATT ACTGGTGACA TTGCGAATTA TACAGGGGCT GGGCGCCGGG
GCGGAAATTT CCGGCGCGGG TACTATGCTG GCCGAGTATG CGCCGAAAGG AAAGCGTGGT
ATCATTTCCT CGCTGGTCGC GATGGGCACC AACTGCGGTA CGTTGAGCGC GACGGCGATC
TGGGCGGTGA TGTTCTTTGC GCTTGAACGC GAACAACTGA TCGCCTGGGG ATGGCGTATT
CCTTTCCTGG CGAGCGTCGT TGTTATGATA TTCGCGATCT GGCTGCGAAT GAATCTGAAA
GAAAGTCCGG TATTCGAAAA AGTAAGCGAA GGCGAAAAAT CGCCAGCGTT AACGCCTGCG
TCAGAAAATA CATTGGGCGC GATGTTTACC AGCAAATCTT TCTGGCTGGC TACCGGTTTA
CGTTTTGGGC AGGCGGGCAA TTCCGGGCTT ATTCAAACCT TCCTTGCCGG ATATTTAGTT
CAGACGTTAT TATTTAACAA ATCTATCCCA ACCGATGCGT TAATGATAAG TTCCGTAATT
GGTTTTATCA CTATCCCACT CTTGGGGTGG TTGTCCGATA AATACGGTCG TCGGCTGCCG
TATATAATAT TGAATATCTC CGCGATTATT CTCGCCTGGC CGATGCTGTC TATTGTGGTA
GATAAAACGT ATAGCCCTGG CGTAATTATG GCGGCGCTCA TTGTTATTCA TAACTTTGCC
GTGCTGGGAT TATTTGCGCT GGAAAACATC ACCATGGCGG AAATTTTCGG ATCGCGTAAT
CGCTTCACCC GGATGGCGAT TTCAAAAGAG GCAGGGGGGC TGGTGGCGGT CGGTTTTGGC
CCCGTCCTCG CAGGGATCTT TTGTAACATG ACCGATTCCT GGCTGCCCAT CTTAATTATG
CTGGTGCTCT ACTCGTGTAT TGGTCTGATT TCTGCGTTGT TGATGCCGGA GGTCAGAGAT
CGCGATCTGA GCTTGCCTGA GGATGCGGCG GAAGCGACAG CGGCAGAGAA GTTACGCCAC
TCCGCAACCC AGACGAGTTA A
 
Protein sequence
MRAAVSGWLG TALEFMDFQL YSLGAALVFH EIFFPEQSAA MALILAMGTY GAGYIARIIG 
AFVFGKMGDR IGRKKVLFIT ITMMGICTTL IGVLPTYAQI GIFAPVLLVT LRIIQGLGAG
AEISGAGTML AEYAPKGKRG IISSLVAMGT NCGTLSATAI WAVMFFALER EQLIAWGWRI
PFLASVVVMI FAIWLRMNLK ESPVFEKVSE GEKSPALTPA SENTLGAMFT SKSFWLATGL
RFGQAGNSGL IQTFLAGYLV QTLLFNKSIP TDALMISSVI GFITIPLLGW LSDKYGRRLP
YIILNISAII LAWPMLSIVV DKTYSPGVIM AALIVIHNFA VLGLFALENI TMAEIFGSRN
RFTRMAISKE AGGLVAVGFG PVLAGIFCNM TDSWLPILIM LVLYSCIGLI SALLMPEVRD
RDLSLPEDAA EATAAEKLRH SATQTS