Gene SeHA_C1663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1663 
Symbol 
ID6490256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1617468 
End bp1618370 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content53% 
IMG OID642741886 
Productsubstrate-binding region of ABC-type glycine betaine transport system 
Protein accessionYP_002045531 
Protein GI194449370 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATTCA AAAAACACCT GTTGGGATGG CTTGCCGCAA CGCTGTTGTT CAGTAGCCAG 
ACGCAGGCCG CGCCGCTGGT TCTCGCCACC AAAAGCTTTA CCGAGCAGCA TATTCTTTCC
GCAATGACCG TTCAGTATTT GCAGAAGAAA GGCTTTCAGG TTCAGCCGCA AACCAATATC
GCCGCGGTGA TTTCACGTAA TGCGATGGTG AATAAACAAA TTGATATTAC CTGGGAATAC
ACCGGTACAT CGCTGATTAT TTTCAACCGT ATCGACAAGC GCATGAGTCC ACAGGAAACC
TACGACACGG TAAAACGCCT GGATGCGAAG CTGGGCCTGG TATGGCTCAA ACCGGCTGAC
ATGAACAATA CTTACGCGTT CGCGATGCAA CGCAAACGCG CCGAGTCGGA AAATATCACC
ACCATCTCGC AAATGGTGGC AAAAATCGAA CAAGTCCGGC AGAACGATCC TGACCACAAC
TGGATGCTCG GCCTCGATCT GGAATTTGCC GGGCGCAGCG ACGGGATGAA GCCCCTTCAG
CAAGCCTACC AGATGCAGCT CGATCGCCCG CAAATACGAC AGATGGACCC AGGGCTGGTC
TATAACGCCG TTCGGGATGG GCTGGTTGAC GCCGGGCTGG TCTATACCAC CGACGGACGG
GTGAAAGGGT TTGATCTGAA AGTGCTGGAA GATGATAAAG GCTTCTTTCC AAGTTACGCT
GTCACGCCCG TGGTGCGTAA AGAGGTGCTG GAAGCCAATC CTGGCCTTGA TGACGCCTTA
AACACCCTTT CCGGCCTGCT CAATAACGAT GTGATATCGA CCCTAAACGC CCAGGTCGAT
ATCGAGCATC GCACGCCGCA ACAGGTAGCC CATCAATTTT TGCAGGACAA AGGTCTGCTG
TAA
 
Protein sequence
MRFKKHLLGW LAATLLFSSQ TQAAPLVLAT KSFTEQHILS AMTVQYLQKK GFQVQPQTNI 
AAVISRNAMV NKQIDITWEY TGTSLIIFNR IDKRMSPQET YDTVKRLDAK LGLVWLKPAD
MNNTYAFAMQ RKRAESENIT TISQMVAKIE QVRQNDPDHN WMLGLDLEFA GRSDGMKPLQ
QAYQMQLDRP QIRQMDPGLV YNAVRDGLVD AGLVYTTDGR VKGFDLKVLE DDKGFFPSYA
VTPVVRKEVL EANPGLDDAL NTLSGLLNND VISTLNAQVD IEHRTPQQVA HQFLQDKGLL