Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C1627 |
Symbol | |
ID | 6488266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 1578689 |
End bp | 1580896 |
Gene Length | 2208 bp |
Protein Length | 735 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642741850 |
Product | electron transport complex protein RnfC |
Protein accession | YP_002045495 |
Protein GI | 194448184 |
COG category | [C] Energy production and conversion |
COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
TIGRFAM ID | [TIGR01945] electron transport complex, RnfABCDGE type, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0777449 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 0.304577 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTAAAC TATTTTCCGC TTTCAGAAAA GATAAAATCT GGGATTTCGA CGGTGGTATT CATCCGCCCG AAATGAAGAC CCAGTCAAAC GGCACGCCGC TGCGCCAGGT GCCTTTAGCG CCGCGCTTCG TTATCCCCTT AAAACAGCAC ATTGGCGCTG AGGGCGAGCT GTGCGTTAGC GTCGGCGATC GCGTGCTACG CGGCCAGGCG CTTACCCGTG GACGTGGGAG AATGCTGCCG GTACACGCGC CCACCTCCGG GACGGTTATC GCTATTGCCC CCCACTCGAC GGCACATCCT TCGGCGCTGG CGGAGTTAAG CGTCATCATT GATGCCGACG GCGAGGACCG CTGGATTGAA CGCGAGGGCT GGTCTGATTA CCGCGCCCAC AGCCGTGAAG CGCTCATTGA ACGCATTCAT CAATATGGCG TTGCCGGGCT TGGCGGCGCA GGGTTTCCCA CCGGCGTTAA ATTGCAGGGC GGCGGCGATA AAATCACCAC GCTTATTATC AATGCCGCAG AGTGCGAACC TTACATTACG GCGGACGATC GTCTGATGCA GGACTGCGCC GCGCAGATTG TGGAAGGTAT TCGCATCCTG GCGCATATTC TGCAACCGCG TGAGGTATTA ATCGGCATTG AAGATAACAA ACCGCAGGCT ATTTCCATGC TGCGCGCCGT ACTGGCTGAC GCTCACGATA TTTCGTTACG TGTGATCCCA ACCAAATACC CTTCCGGCGG CGCAAAACAG CTCACCCAAA TACTGACGGG AAAACAGGTT CCCCACGGCG GGCGCTCCTC TGATATTGGC GTGCTGATGC AAAACGTCGG TACGGCTTAT GCCGTGAAAC GTGCCGTGGT TGACGGCGAA CCGATCACAG AACGCGTCGT TACCTTAACG GGTGAAGCGG TAAGCCGCCC GGGTAACGTC TGGGCGCGGC TCGGCACTCC CGTTCGTCAT TTGCTTAACG ATGCCGGGTT CTGCCCTTCT GCTGACCAGA TGGTCATCAT GGGCGGCCCG TTGATGGGAT TCACCCTTCC CTGGCTTGAC GTACCGGTCG TAAAAATCAC CAACTGCCTG CTGGCGCCAT CCGTGACTGA AATGGGAGCG CCTCAGGAAG AGAAAAGCTG TATTCGTTGC AGCGCTTGCG CTGACGCTTG CCCTGCCGAC CTTTTACCGC AGCAGCTTTA TTGGTTCAGC AAAGGGCAGC AGCATGACAA GGCTACCGCT CACCATATTG CTGATTGTAT AGAATGCGGC GCCTGCGCCT GGGTCTGCCC CAGTAATATT CCGCTCGTCC AATATTTCCG TCAGGAAAAA GCGGAGATTA ATGCGATCAG GCTTGAAGAA AAACGCGCCG CCGAAGCCAA AGCACGTTTT GAGGCTCGTC AGGCAAGACT GGAGCGCGAA AAAGCCGCCC GCCTTGCACG TCATAAGAGC GCAGCGGTAC AACCAGCGGC AAAAGATCAG GATGCCATTG CCGCTGCGCT GGCGCGGGTA AAAGAGAAAC AGGCGCAGGC CACGCAACCG GTGGTTATTC AGGCGGGTAG TCTGCCAGAC AATAGCGCCG TCATCGCGGC CCGTGAAGCG CGTAAAGCGC AAGCGCGCGC TAAACAAGCC GCTCATCCGG TGGCTGACAG CGCGATACCC GGCGACGACC CGCGTAAAGC CGCAGTGGAG GCGGCTATCG CTCGCGCCAA AGCCCGCAAA CAGGAGCAGC AGGCCGGAAG CGAACCTGCC GAACCGGTCG ATCCGCGCAA AGCCGCGGTG GAGGCGGCCA TCGCCCGCGC CAAAGCCCGC AAACAGGAGC AGCAGGCCGG AAGCGAACCT GCCGAAGCGG TCGACCCGCG CAAAGCCGCG GTGGAAGCGG CTATCGCCCG CGCCAAAGCC CGCAAGCAGG AGCAGCAGGC CGGAGGCGAA CCTGCCGAAG CGGTCGATCC GCGCAAAGCC GCGGTGGAAG CGGCTATCGC CCGCGCCAAA GCCCGTAAGC AGGAGCAGCA GACCGGAAGC GAACCTGCCG AACCGGTCGA TCCGCGTAAA GCCGCGGTGG AAGCGGCCAT CGCCCGCGCC AAAGCTCGTA AACAGGAGCA GCAGGCCGGA AGCGAACCTG CCGAACCGGC CGACCCGCGT AAAGCCGCGG TTGCTGCGGC TATCGCCCGC GTTCAGGCAA AAAAAGCAGC ACAGCAGCAG GTTGTTAACG AGGATTAA
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Protein sequence | MLKLFSAFRK DKIWDFDGGI HPPEMKTQSN GTPLRQVPLA PRFVIPLKQH IGAEGELCVS VGDRVLRGQA LTRGRGRMLP VHAPTSGTVI AIAPHSTAHP SALAELSVII DADGEDRWIE REGWSDYRAH SREALIERIH QYGVAGLGGA GFPTGVKLQG GGDKITTLII NAAECEPYIT ADDRLMQDCA AQIVEGIRIL AHILQPREVL IGIEDNKPQA ISMLRAVLAD AHDISLRVIP TKYPSGGAKQ LTQILTGKQV PHGGRSSDIG VLMQNVGTAY AVKRAVVDGE PITERVVTLT GEAVSRPGNV WARLGTPVRH LLNDAGFCPS ADQMVIMGGP LMGFTLPWLD VPVVKITNCL LAPSVTEMGA PQEEKSCIRC SACADACPAD LLPQQLYWFS KGQQHDKATA HHIADCIECG ACAWVCPSNI PLVQYFRQEK AEINAIRLEE KRAAEAKARF EARQARLERE KAARLARHKS AAVQPAAKDQ DAIAAALARV KEKQAQATQP VVIQAGSLPD NSAVIAAREA RKAQARAKQA AHPVADSAIP GDDPRKAAVE AAIARAKARK QEQQAGSEPA EPVDPRKAAV EAAIARAKAR KQEQQAGSEP AEAVDPRKAA VEAAIARAKA RKQEQQAGGE PAEAVDPRKA AVEAAIARAK ARKQEQQTGS EPAEPVDPRK AAVEAAIARA KARKQEQQAG SEPAEPADPR KAAVAAAIAR VQAKKAAQQQ VVNED
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