Gene SeHA_C1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1612 
Symbol 
ID6491583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1565706 
End bp1566566 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content50% 
IMG OID642741835 
ProductP-hydroxybenzoic acid efflux pump subunit AaeA 
Protein accessionYP_002045480 
Protein GI194451647 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.390919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value0.473839 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTAA AAACAATAAA ATATTTTTCT ACTCTCATTG TCGCCGTCGT CGCCGTTCTG 
GCCGCGTGGT GGCTATGGAA TTACTATATG CAATCGCCAT GGACGCGCGA TGGTAAAATC
CGCGCGGAAC AGGTCAGCGT AACGCCGCAG GTTTCTGGCA GCATTACCCA ACTCAATATC
AAAGATAATC AGTTCGTCAA CGCCGGGGAC GTTCTCTTTG TCATTGATAA AACGCCCTTC
CATATTGCAG AACTTAACGC GCAGGCGCAG TTGGCCAAAG CGCAGTCCGA TCTGGCAAAA
GCGAATAATG AAGCCGATCG ACGTCGACAT TTATCGCGTA ACTACATCTC TGCTGAAGAT
CTGGATAGCG CCAATCTGAA TGTTAAAGCG ATGCAGGCCA GCGTAGATGT CGCACTGGCG
ACGTTAAAAC AGGCGCAGTG GCAGCTTAGC CAGACGGAAG TAAAAGCGCC GGTATCCGGC
TGGGTGACCA ACCTTTCCAC GCGTACCGGT GATTATGCCA GCACCGGTAA GCCACTTTTC
GCCCTGGTAG ATAGCCATTC ATTTTATGTA ATGGGATATT TCGAAGAAAC CAAACTACGC
CACATCCGCG AAGGTGAGCC TGCATTAATA ACACTGTATA GTGGCAATGT TAAGTTACAG
GGTCACGTTG GCAGTATCGG GCGCGCTATT TACGATCAAA GCGTGGAAAG TGACTCCGGT
TTAGTGCCCG ATATCAAACC CAACGTACCG TGGGTACGTC TGGCGCAACG CGTACCGGTA
CGTATCGAAT TTGACGCTTT GCCGCAGGAT ATCACGCTCG TCTCCGGCAC TACCTGCAGC
GTAGCCATTG GACAGCAGTA A
 
Protein sequence
MSLKTIKYFS TLIVAVVAVL AAWWLWNYYM QSPWTRDGKI RAEQVSVTPQ VSGSITQLNI 
KDNQFVNAGD VLFVIDKTPF HIAELNAQAQ LAKAQSDLAK ANNEADRRRH LSRNYISAED
LDSANLNVKA MQASVDVALA TLKQAQWQLS QTEVKAPVSG WVTNLSTRTG DYASTGKPLF
ALVDSHSFYV MGYFEETKLR HIREGEPALI TLYSGNVKLQ GHVGSIGRAI YDQSVESDSG
LVPDIKPNVP WVRLAQRVPV RIEFDALPQD ITLVSGTTCS VAIGQQ