Gene SeHA_C1604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1604 
Symbolrnt 
ID6489394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1558822 
End bp1559469 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content54% 
IMG OID642741827 
Productribonuclease T 
Protein accessionYP_002045472 
Protein GI194451220 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID[TIGR01298] ribonuclease T 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATA ACGCTCAACT TTCCGGTCTG TGCGACCGTT TTCGTGGTTT TTATCCTGTC 
GTCATCGACG TTGAAACTGC AGGATTTAAC GCTAAAACCG ATGCGCTGCT CGAAATCGCC
GCCATCACGC TGAAAATGGA TGAACAAGGC TGGCTGATGC CGGACATGAC GCTGCATTTC
CATGTGGAGC CGTTCGCTGG AGCCAACTTA CAGCCGGAAG CGCTTGCGTT TAACGGTATC
GATCCCTCTA ACCCGCTACG CGGCGCGGTG AGTGAATATG AGGCGCTACA CGCTATTTTC
AAAATGGTGC GTAAAGGTAT CAAAGACAGC GGTTGTAGCC GCGCCATTAT GGTCGCGCAT
AACGCCACTT TTGATCACAG TTTTATGATG GCCGCCGCAG AGCGCGCCTC GCTGAAACGT
AACCCGTTTC ATCCGTTCGT CACCTTTGAT ACTGCGGCAT TGAGCGGACT GGCGCTGGGA
CAAACGGTGT TATCAAAAGC GTGCCTGGCG GCAGGTATGG AGTTTGACGG TGAAAAGGCC
CACTCCGCTT TGTATGATAC CGAGCGGACA GCGGTGCTGT TTTGTGAAAT TGTCAATCGC
TGGAAGCGCC TGGGCGGCTG GCCGTTACCT TTGCCGACGG ACAAATAA
 
Protein sequence
MSDNAQLSGL CDRFRGFYPV VIDVETAGFN AKTDALLEIA AITLKMDEQG WLMPDMTLHF 
HVEPFAGANL QPEALAFNGI DPSNPLRGAV SEYEALHAIF KMVRKGIKDS GCSRAIMVAH
NATFDHSFMM AAAERASLKR NPFHPFVTFD TAALSGLALG QTVLSKACLA AGMEFDGEKA
HSALYDTERT AVLFCEIVNR WKRLGGWPLP LPTDK