Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C1565 |
Symbol | |
ID | 6491058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 1515700 |
End bp | 1516404 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642741789 |
Product | IS26 transposase |
Protein accession | YP_002045434 |
Protein GI | 194449955 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3316] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.106684 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 90 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCAT TCAAAGGCCG GCATTTTCAG CGTGACATCA TTCTGTGGGC CGTACGCTGG TACTGCAAAT ACGGCATCAG TTACCGTGAG CTGCAGGAGA TGCTGGCTGA ACGCGGAGTG AATGTCGATC ACTCCACGAT TTACCGCTGG GTTCAGCGTT ATGCGCCTGA AATGGAAAAA CGGCTGCGCT GGTACTGGCG TAACCCTTCC GATCTTTGCC CGTGGCACAT GGATGAAACC TACGTGAAGG TCAATGGCCG CTGGGCGTAT CTGTACCGGG CCGTCGACAG CCGGGGCCGC ACTGTCGATT TTTATCTCTC CTCCCGTCGT AACAGCAAAG CTGCATACCG GTTTCTGGGT AAAATCCTCA ACAACGTGAA GAAGTGGCAG ATCCCGCGAT TCATCAACAC GGATAAAGCG CCCGCCTATG GTCGCGCGCT TGCTCTGCTC AAACGCGAAG GCCGGTGCCC GTCTGACGTT GAACACCGAC AGATTAAGTA CCGGAACAAC GTGATTGAAT GCGATCATGG CAAACTGAAA CGGATAATCG GCGCCACGCT GGGATTTAAA TCCATGAAGA CGGCTTACGC CACCATCAAA GGTATTGAGG TGATGCGTGC ACTACGCAAA GGCCAGGCCT CAGCATTTTA TTATGGTGAT CCCCTGGGCG AAATGCGCCT GGTAAGCAGA GTTTTTGAAA CGTAA
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Protein sequence | MNPFKGRHFQ RDIILWAVRW YCKYGISYRE LQEMLAERGV NVDHSTIYRW VQRYAPEMEK RLRWYWRNPS DLCPWHMDET YVKVNGRWAY LYRAVDSRGR TVDFYLSSRR NSKAAYRFLG KILNNVKKWQ IPRFINTDKA PAYGRALALL KREGRCPSDV EHRQIKYRNN VIECDHGKLK RIIGATLGFK SMKTAYATIK GIEVMRALRK GQASAFYYGD PLGEMRLVSR VFET
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