Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C1551 |
Symbol | epaO |
ID | 6488449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 1503223 |
End bp | 1504191 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642741774 |
Product | type III secretion system protein |
Protein accession | YP_002045421 |
Protein GI | 194448655 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
TIGRFAM ID | [TIGR02551] type III secretion system apparatus protein YscQ/HrcQ |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 86 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAAGAA TAGCGAATGA AGAGCGTCCG TGGGTGGAGA TACTTCCAAC GCAAGGCGCT ACCATTGGTG AGCTGACATT GAGTATGCAA CAATATCCAG TACAGCAAGG GACATTATTT ACCATAAATT ATCATAATGA GCTGGGTAGG GTGTGGATTG CAGAACAATG CTGGCAGCGC TGGTGTGAAG GGCTAATTGG CACCGCTAAT CGATCGGCTA TCGATCCTGA ATTGCTATAT GGAATAGCTG AATGGGGGCT GGCGCCGTTA TTGCAAGCCA GTGATGCAAC CCTCTGTCAG AACGAACCGC CAACATCCTG CAGTAATCTA CCACATCAGC TAGCGTTGCA TATTAAATGG ACAGTTGAAG AACATGAGTT CCATAGCATT ATTTTTACAT GGCCAACGGG TTTTTTGCGC AATATAGTCG GAGAGCTTTC TGCTGAGCGA CAACAGATTT ATCCTGCCCC TCCTGTAGTA GTCCCTGTAT ATTTAGGCTG GTGCCAGCTT ACGTTAATTG AACTTGAGTC TATCGAAATC GGCATGGGCG TTCGGATTCA TTGCTTTGGC GACATCAGAC TCGGTTTTTT TGCTATTCAA CTACCTGGGG GGATCTACGC GAGGGTGTTG CTGACAGAGG ATAACACGAT GAAATTTGAT GAATTAGTCC AGGATATCGA AACGCTACTT GCGTCAGGGA GTCCAATGTC AAAGAGTGAC GGAACATCTT CAGTAGAACT TGAGCAGATA CCACAACAGG TGCTCTTTGA GATCGGACGT GCGAGTCTGG AAATTGGACA ATTACGACAG CTTAAAACGG GGGACGTTTT GCCTGTAGGT GGATGTTTTG CGCCAGAGGT GACGATAAGA GTAAATGACC GTATTATTGG GCAAGGTGAG TTGATTGCCT GTGGCAATGA ATTTATGGTG CGTATTACAC GTTGGTATCT TTGCAAAAAT ACAGCGTAA
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Protein sequence | MLRIANEERP WVEILPTQGA TIGELTLSMQ QYPVQQGTLF TINYHNELGR VWIAEQCWQR WCEGLIGTAN RSAIDPELLY GIAEWGLAPL LQASDATLCQ NEPPTSCSNL PHQLALHIKW TVEEHEFHSI IFTWPTGFLR NIVGELSAER QQIYPAPPVV VPVYLGWCQL TLIELESIEI GMGVRIHCFG DIRLGFFAIQ LPGGIYARVL LTEDNTMKFD ELVQDIETLL ASGSPMSKSD GTSSVELEQI PQQVLFEIGR ASLEIGQLRQ LKTGDVLPVG GCFAPEVTIR VNDRIIGQGE LIACGNEFMV RITRWYLCKN TA
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