| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C1547 |
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| Symbol | |
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| ID | 6488985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011083 |
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| Strand | + |
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| Start bp | 1499171 |
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| End bp | 1501216 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642741770 |
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| Product | secretion system apparatus protein SsaV |
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| Protein accession | YP_002045417 |
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| Protein GI | 194451914 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4789] Type III secretory pathway, component EscV |
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| TIGRFAM ID | [TIGR01399] type III secretion protein, HrcV family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.234827 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 77 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTCAT GGTTAGGTGA GGGAGTCAGG GCGCAACAGT GGCTCAGTGT ATGCGCGGGT
CGGCAGGATA TGGTTCTGGC GACGGTGTTA TTAATCGCTA TTGTGATGAT GCTGTTACCT
TTGCCGACCT GGATGGTTGA TATCCTGATT ACTATCAACC TTATGTTTTC AGTGATCCTG
CTCTTAATTG CTATTTATCT TAGTGACCCT CTCGATTTAT CGGTATTTCC GTCTTTATTA
CTTATTACTA CATTATATCG TTTGTCACTC ACAATCAGCA CATCACGGCT GGTACTGTTA
CAACATAATG CCGGTAATAT TGTGGATGCT TTCGGTAAGT TTGTCGTAGG AGGAAATCTC
ACCGTTGGGT TGGTCGTATT TACCATCATT ACTATCGTGC AATTTATTGT CATTACAAAA
GGTATCGAGA GGGTGGCGGA AGTTAGCGCA CGTTTCTCGC TTGATGGGAT GCCAGGCAAA
CAAATGAGTA TCGATGGCGA TTTGCGTGCC GGAGTTATCG ATGCAGACCA TGCCCGTACA
TTAAGACAGC ATGTCCAGCA GGAAAGCCGC TTTCTCGGTG CGATGGACGG TGCGATGAAA
TTTGTTAAAG GCGATACGAT TGCCGGTATT ATTGTTGTTC TGGTGAACAT TATCGGCGGT
ATCATTATCG CTATCGTACA ATATGATATG TCGATGAGTG AGGCTGTTCA CACTTATAGC
GTACTGTCAA TCGGAGATGG TTTATGTGGG CAAATTCCAT CGCTGCTGAT TTCCCTTAGC
GCGGGAATTA TTGTCACCCG TGTCCCGGGT GAGAAACGCC AGAACCTGGC GACAGAGTTG
AGTTCTCAAA TTGCCAGACA ACCTCAGTCG CTCATATTAA CCGCTGTGGT TTTAATGCTC
CTCGCTTTAA TTCCTGGCTT TCCTTTTATC ACTCTCGCTT TCTTTTCAGC GTTGTTAGCA
TTGCCAATTA TCCTCATTCG CCGCAAAAAG TCTGTGGTTT CCGCAAATGG CGTCGAAGCA
CCGGAAAAAG ATAGTATGGT TCCCGGCGCA TGTCCTCTAA TCTTACGTCT TAGCCCGACG
TTACATTCTG CCGACCTGAT TCGTGATATT GACGCCATGA GATGGTTTTT ATTTGAGGAT
ACCGGCGTCC CTCTCCCTGA GGTGAATATT GAGGTTTTGC CTGAACCCAC CGAAAAATTG
ACGGTACTGC TATATCAGGA ACCCGTATTT AGTTTATCTA TTCCCGCTCA GGCGGATTAT
TTATTGATAG GCGCGGACGC TAGTGTGGTG GGTGACAGCC AGACGTTACC GAACGGGATG
GGGCAGATCT GTTGGCTTAC AAAAGACATG GCCCATAAGG CGCAAGGTTT TGGACTGGAC
GTTTTCGCGG GCAGCCAACG TATCTCTGCC TTATTAAAAT GTGTCCTGCT TCGGCATATG
GGAGAGTTTA TTGGTGTTCA GGAAACGCGT TATCTAATGA ATGCGATGGA AAAAAACTAC
TCTGAGCTGG TGAAAGAGCT TCAGCGCCAG TTACCCATTA ATAAAATCGC TGAAACTTTG
CAACGGCTTG TATCAGAGCG GGTTTCTATT AGAGATTTAC GTCTTATTTT CGGCACCTTA
ATTGACTGGG CGCCACGTGA AAAAGATGTC CTGATGTTGA CAGAATATGT CCGTATCGCG
CTTCGTCGTC ATATTCTGCG TCGTCTTAAT CCGGAAGGAA AACCGCTGCC GATTTTGCGG
ATCGGCGAAG GTATTGAAAA CCTCGTGCGT GAATCCATTC GCCAGACGGC AATGGGGACC
TATACTGCGC TGTCGTCTCG TCATAAGACG CAGATCCTGC AACTTATCGA GCAGGCGCTG
AAGCAGTCAG CCAAATTATT CATTGTCACT TCTGTCGACA CCCGACGTTT CTTGCGAAAA
ATTACAGAAG CCACCTTGTT CGACGTACCG ATTTTGTCAT GGCAGGAATT AGGAGAGGAG
AGCCTTATAC AAGTGGTAGA AAGTATTGAC CTTAGCGAAG AGGAGTTGGC GGACAATGAA
GAATGA
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| Protein sequence | MRSWLGEGVR AQQWLSVCAG RQDMVLATVL LIAIVMMLLP LPTWMVDILI TINLMFSVIL
LLIAIYLSDP LDLSVFPSLL LITTLYRLSL TISTSRLVLL QHNAGNIVDA FGKFVVGGNL
TVGLVVFTII TIVQFIVITK GIERVAEVSA RFSLDGMPGK QMSIDGDLRA GVIDADHART
LRQHVQQESR FLGAMDGAMK FVKGDTIAGI IVVLVNIIGG IIIAIVQYDM SMSEAVHTYS
VLSIGDGLCG QIPSLLISLS AGIIVTRVPG EKRQNLATEL SSQIARQPQS LILTAVVLML
LALIPGFPFI TLAFFSALLA LPIILIRRKK SVVSANGVEA PEKDSMVPGA CPLILRLSPT
LHSADLIRDI DAMRWFLFED TGVPLPEVNI EVLPEPTEKL TVLLYQEPVF SLSIPAQADY
LLIGADASVV GDSQTLPNGM GQICWLTKDM AHKAQGFGLD VFAGSQRISA LLKCVLLRHM
GEFIGVQETR YLMNAMEKNY SELVKELQRQ LPINKIAETL QRLVSERVSI RDLRLIFGTL
IDWAPREKDV LMLTEYVRIA LRRHILRRLN PEGKPLPILR IGEGIENLVR ESIRQTAMGT
YTALSSRHKT QILQLIEQAL KQSAKLFIVT SVDTRRFLRK ITEATLFDVP ILSWQELGEE
SLIQVVESID LSEEELADNE E
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