Gene SeHA_C1525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1525 
Symbol 
ID6488533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand- 
Start bp1480775 
End bp1481503 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content55% 
IMG OID642741748 
ProductMerR family transcriptional regulator 
Protein accessionYP_002045395 
Protein GI194450959 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.00175945 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGTATT CTATAGGCGA ATTTGCCAGA CTATGCGGTA TCAATGCCGC CACGCTAAGG 
GCATGGCAGC GACGCTATGG TTTATTGAAA CCGCAGCGTA CTGATGGCGG GCATCGCTTA 
TACAGCGATG ACGATATTCG ACAAGCGCTT AGCATCCTCG ACTGGGTGAG AAAAGGCGTA 
CCGATAAGCC AGGTCAAACC CTTACTGTCG CGTCCGGTCA TTCGCCTGGG CGATAACTGG 
ATAACGATCC AGGAGACGAT GCTCCAACAT CTCCACGAAG GGCGAATTGA CGCGCTGCGG 
CAGTTGATTT ATGACTGTGG CCGGGAATAT CCTCGCGCAG AACTGGTGAC CCATTTATTG 
CGTCCGTTGC GCAGCAAAGT GTCCGCGCAC CTTCCCGCCG TGATGACGCT GCGCGAAATA 
CTGGATGGCA TCATTATTGC CTACACCTCT TTTTGCCTTG AAGGCGACAG AAAAGCGCCT 
GGCAACAATG CCTTTATTAG CGGATGGCAT CTCTCGGATC ACTGTGAAAT CTGGCTGGAA 
GCGTTGACTC GTACCGGACA AGAGCTGCGG CTCAATGTGC TTCCCTCTCC CCCAGTCGTG 
CTGGCGCCCG AGCTGTTCGC CCAGAGAAAA TGGTTCCTGG TGACCACCGG AAAGCTCACT 
GCCGGGCAGA AAAAACAGCT TGCCCAGTGG CGCAACGTGG TCGCTTCGCT GGAGGTTATC 
ACACTATAG
 
Protein sequence
MSYSIGEFAR LCGINAATLR AWQRRYGLLK PQRTDGGHRL YSDDDIRQAL SILDWVRKGV 
PISQVKPLLS RPVIRLGDNW ITIQETMLQH LHEGRIDALR QLIYDCGREY PRAELVTHLL 
RPLRSKVSAH LPAVMTLREI LDGIIIAYTS FCLEGDRKAP GNNAFISGWH LSDHCEIWLE 
ALTRTGQELR LNVLPSPPVV LAPELFAQRK WFLVTTGKLT AGQKKQLAQW RNVVASLEVI 
TL