| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C1492 |
|---|
| Symbol | |
|---|
| ID | 6489874 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | - |
|---|
| Start bp | 1448144 |
|---|
| End bp | 1449355 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642741721 |
|---|
| Product | inner membrane transport protein YdiM |
|---|
| Protein accession | YP_002045368 |
|---|
| Protein GI | 194448801 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.915768 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 0.0211513 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATC GTTATTTCCC TACCGCTGTA GGGTTGTATT TTAATTACTT TGTACATGGC
ATGGGGGTTA TCCTGATGAG CCTGAACATG TCATCGCTTG AACAGCAATG GCATACCAGT
GCCGCAGGCG TATCTATTGT GATCTCTTCG CTTGGTATTG GCCGGCTAAG CGTTTTGTTA
ATCGCCGGTA TGCTTTCCGA TCGCTTTGGT CGCCGTCCTT TTATCATTCT GGGGACCGCC
TGTTACCTGA TTTTTTTCAT TGGCATTCTT TATGCTCAGA CGATTTTTGT CGCTTATGCC
TGTGGTTTTT TAGCGGGTAT GGCCAACAGT TTTTTAGATG CAGGTACCTA TCCCAGTTTG
ATGGAAGCCT TCCCTCGCTC CCCCAGTACG GCAAATATTC TGATTAAAGC ATTTGTCTCT
GGCGGGCAAT TCTTGTTGCC CATTATTATC AGTTTATTAG TCTGGGCTAA TATGTGGTTT
GGCTGGTCCT TCCTGCTTGC CGGGGCGATC ATGCTTATTA ATGCTCTGTT TTTATTACGC
TGTCCTTTTC CACCCTATCC TGGTCGGATA TTGAAGCCCA AAATCTCGCA AGCGCCTGTC
ACAGGCGTAC ATCATTGCTC CCTCATCGAT CTTATCAGCT ACACCCTTTA TGGCTATATC
TCGATGGCAA CCTTTTATCT TATCAGCCAG TGGCTGGCGC AGTATGGACA GTTCGTCGCA
GGAATGTCGT ATACCCAATC CATCAAACTG TTAAGTATTT ATACCTGCGG ATCGCTACTC
TGCGTTTTTA TTACCGCCCC GCTGGTCAGA AAAACAATTC GCTCTACCAC ATTATTGATG
TTTTATACCT TTATCTCTTT TATTGCGCTT CTGACGGTCT GCCTGCATCC TCAGGCCTAT
GTTGTTATGA TCTTCGCATT CGTCATTGGA TTCTCTTCCG CCGGTGGCGT AGTACAAATC
GGCCTGACGC TGATGGCGGC CCGTTTTCCA CAGGAGAAAG GTAAAGCGAC CGGCATTTAT
TACAGCGCCG GCAGTATCGC GACGTTCACT ATTCCGTTGA TCACAGCGCG GATTTCAGAA
ATGAGCATTG CACATATTAT GTGGTTTGAT ACCGGTATCG CCGCAGCGGG ATTTCTCCTC
GCGCTGTTCA TCGGTTACCG AAGTCGGGCT GAATCACAAC ATCACGCTGT AGCAGCGTCA
ACTGCACAAT AA
|
|---|
| Protein sequence | MKNRYFPTAV GLYFNYFVHG MGVILMSLNM SSLEQQWHTS AAGVSIVISS LGIGRLSVLL
IAGMLSDRFG RRPFIILGTA CYLIFFIGIL YAQTIFVAYA CGFLAGMANS FLDAGTYPSL
MEAFPRSPST ANILIKAFVS GGQFLLPIII SLLVWANMWF GWSFLLAGAI MLINALFLLR
CPFPPYPGRI LKPKISQAPV TGVHHCSLID LISYTLYGYI SMATFYLISQ WLAQYGQFVA
GMSYTQSIKL LSIYTCGSLL CVFITAPLVR KTIRSTTLLM FYTFISFIAL LTVCLHPQAY
VVMIFAFVIG FSSAGGVVQI GLTLMAARFP QEKGKATGIY YSAGSIATFT IPLITARISE
MSIAHIMWFD TGIAAAGFLL ALFIGYRSRA ESQHHAVAAS TAQ
|
|---|
| |