Gene SeHA_C1488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1488 
Symbol 
ID6488496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1442911 
End bp1444506 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content49% 
IMG OID642741717 
Productpropionate CoA-transferase 
Protein accessionYP_002045364 
Protein GI194451862 
COG category[I] Lipid transport and metabolism 
COG ID[COG4670] Acyl CoA:acetate/3-ketoacid CoA transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.361869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.00740492 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAATCA ATAAGCCATC ACGCATTAAT GGCCGCGTTC CCGTGCTCTC TGCACAAGAA 
GCAGTAAATT ATATTCCAGA TGAGGCCACT TTATGTATTC TGGGCGCAGG CGGCGGTATT
CTCGAAGCGA CAACATTAAT TACCGCACTG GCAGATAAAT ATCAAACAAC CCAGTCACCA
CGAGATTTAT CTATTATTAG CCCTACCGGA TTAGGTGACC GCGCCGATCG CGGCATCAGC
CCGCTGGCGC AGGAGGGATT GGTAAAATGG GCGCTATGCG GACATTGGGG GCAATCTCCC
CGTATTTCTG AACTGGCTGA ACAAAATAAA ATCGCCGCCT ATAACTACCC ACAAGGCGTA
TTAACCCAGA CGCTGCGCGC CAGCGCCGCA CACCAGCCGG GTATTCTGAG CGATATCGGT
ATTGGAACCT TTGTCGACCC TCGCCATCAA GGCGGAAAAT TAAACGACGT GACTAAAGAA
GACCTCATTA AGCTGGTAGA GATCGATAAT AAAGAATATC TCTATTATAA AGCGATAGCG
CCTAATGTGG CTTTTATCCG CGCCACCACC TGCGACAGCG AAGGCTATGC ATCATTTGAA
GATGAGGTGA TGTATCTTGA TGCGCTGGTG ATCGCCCAGG CCGTTCACAA TAATGGCGGT
ATTGTAATGA TGCAGGTGCA GAAAATGGTA AAAAAAGCCA CGCTGCATCC AAAATCCGTG
CGTATTCCCG GCTATCTGGT GGATATTGTG GTTGTCGACG CCGACCAGAC GCAACTCTAT
GGCGGCGCGC CGGTGAACCG ATTTATCTCC GGGGATTTTA CTCTTGATGA TAGTACCCAG
CTTACCCTGC CCCTTAATCA GCGCAAGCTG GTAGCCCGAC GCGCGCTGTT TGAAATGCGT
AAAGGCGCGG TAGGCAATGT GGGCGTAGGC ATTGCCGACG GCATTGGTCT GGTCGCTCGC
GAGGAAGGCT GCGCCGATGA CTTCGTGCTG ACCGTAGAAA CTGGCCCGGT GGGCGGTATT
ACCTCTCAGG GTGTGGCCTT CGGCGCCAAT GTCAATACCC GCGCGATCCT CGATATGACC
TCACAATTTG ATTTTTATCA CGGCGGTGGG CTCGATGTCT GCTATTTAAG TTTTGCCGAA
GTGGATCAAC ACGGTAATGT CGGTGTACAT AAATTCAACG GCAAAATTAT GGGCACCGGC
GGGTTTATCG ATATTAGCGC AACGTCGCAA AAAATTATTT TCTGCGGAAC TCTGACGGCC
GGAAGTTTAA AAACTGAAAT TACCGATGGC AAATTAAATA TTCTGCAGGA AGGTCGCGTG
AAAAAATTCG TCAGCGAACT GCCGGAAATT ACGTTCAGTG GAAAAATTGC GCTTGAGCGC
GGGTTAGATG TGCGTTACAT CACTGAACGT GCGGTTTTCA CTCTCAAACA AGATGGCCTG
CATTTAATTG AAATTGCGCC TGGCGTCGAT CTGCAACGGG ATATTCTTGA CAAGATGGAT
TTTTCACCGG TTATCTCACC AGATTTAAAA CTGATGGACA CAAGATTATT TACCGATAGC
ACTATGGGAT TCACGCTTCC TGACGCAACA CATTAA
 
Protein sequence
MKINKPSRIN GRVPVLSAQE AVNYIPDEAT LCILGAGGGI LEATTLITAL ADKYQTTQSP 
RDLSIISPTG LGDRADRGIS PLAQEGLVKW ALCGHWGQSP RISELAEQNK IAAYNYPQGV
LTQTLRASAA HQPGILSDIG IGTFVDPRHQ GGKLNDVTKE DLIKLVEIDN KEYLYYKAIA
PNVAFIRATT CDSEGYASFE DEVMYLDALV IAQAVHNNGG IVMMQVQKMV KKATLHPKSV
RIPGYLVDIV VVDADQTQLY GGAPVNRFIS GDFTLDDSTQ LTLPLNQRKL VARRALFEMR
KGAVGNVGVG IADGIGLVAR EEGCADDFVL TVETGPVGGI TSQGVAFGAN VNTRAILDMT
SQFDFYHGGG LDVCYLSFAE VDQHGNVGVH KFNGKIMGTG GFIDISATSQ KIIFCGTLTA
GSLKTEITDG KLNILQEGRV KKFVSELPEI TFSGKIALER GLDVRYITER AVFTLKQDGL
HLIEIAPGVD LQRDILDKMD FSPVISPDLK LMDTRLFTDS TMGFTLPDAT H