Gene SeHA_C1476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1476 
SymbolaroH 
ID6490840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1430441 
End bp1431487 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content53% 
IMG OID642741706 
Productphospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionYP_002045353 
Protein GI194447860 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
TIGRFAM ID[TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value0.774591 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGAA CCGACGAACT CCGTACTGCG CGTATCGACA GCCTGGTAAC ACCGACCGAA 
CTCGCGCAGC GGTATCCTGT ATCGTCCTCC GTCGCCAGTC ACGTTACCGA CTCCCGACGC
CGGATAGAAA AGATTTTAAA TGGTGAAGAT CCACGGCTAC TGGTCGTCAT TGGCCCCTGT
TCGATTCACG ATCTGAATGC TGCCATGGAA TACGCGACGC AGCTCCAGGC ACAACGCCAA
AAGCATCAGG CGCGTCTGGA AATCGTCATG CGCACCTATT TTGAAAAACC GCGCACCGTC
GTGGGATGGA AAGGCCTGAT TTCCGATCCC GACTTGAATG GCAGTTACCG CGTCAATTAT
GGGCTTGAAC TGGCGCGTCG CTTGCTATTG CAGGTGAACG AACTGGGAGT ACCGACCGCC
ACAGAGTTTC TTGATATGGT CACCGGCCAG TTTATTGCCG ATCTGATCAG TTGGGGAGCG
ATTGGCGCGC GTACCACCGA AAGCCAAATC CATCGGGAAA TGGCTTCTGC GCTCTCTTGT
CCGGTCGGCT TTAAAAATGG TACGGATGGC AATACCCGCA TTGCCGTTGA TGCTATTCGC
GCCTCCCGCG CCAGTCATAT GTTTCTCTCG CCGGATAAAG ACGGACAGAT GACTATCTAC
CAAACGAGTG GCAACCCGTA TGGGCACATC ATCATGCGCG GCGGTAAAAA ACCGAACTAC
CACGCTGAAG ATATTGCCGC CGCCTGCGAC ACGTTGCATG AATTTGATCT GCCGGAACAT
CTGGTCGTCG ACTTCAGCCA CGGCAACTGT CAAAAACAGC ATCGCCGCCA GCTGGAGGTA
TGTGATGATA TTTGCCAGCA GATTCGTAAT GGCTCCACGG CAATTGCCGG GATTATGGCC
GAGAGTTTTT TACGGGAAGG CACGCAAAAA ATTATCAGCG GTCAACCATT AATCTATGGT
CAGTCCATTA CCGATCCCTG CCTGAACTGG GAAGATACGG AAGTTTTGTT GGAAAAACTT
GCCGCAGCGG TAGACAGCCG CTTTTAA
 
Protein sequence
MNRTDELRTA RIDSLVTPTE LAQRYPVSSS VASHVTDSRR RIEKILNGED PRLLVVIGPC 
SIHDLNAAME YATQLQAQRQ KHQARLEIVM RTYFEKPRTV VGWKGLISDP DLNGSYRVNY
GLELARRLLL QVNELGVPTA TEFLDMVTGQ FIADLISWGA IGARTTESQI HREMASALSC
PVGFKNGTDG NTRIAVDAIR ASRASHMFLS PDKDGQMTIY QTSGNPYGHI IMRGGKKPNY
HAEDIAAACD TLHEFDLPEH LVVDFSHGNC QKQHRRQLEV CDDICQQIRN GSTAIAGIMA
ESFLREGTQK IISGQPLIYG QSITDPCLNW EDTEVLLEKL AAAVDSRF