Gene SeHA_C1390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1390 
Symbol 
ID6488740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1354899 
End bp1355444 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content47% 
IMG OID642741624 
Productchorismate mutase 
Protein accessionYP_002045271 
Protein GI194448669 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1605] Chorismate mutase 
TIGRFAM ID[TIGR01806] chorismate mutase, putative 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00284187 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value0.322204 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGTC ATATCGCCAT TTTTCTTTGT TCTTTATTGA TGTGCAGCAC CACTTTTGCC 
GATTCGGTAA CGTCGGTATC GCTTGGCGCG CTCTTAACCG CGCTCAATGA ACGCATGTTA
TTAATGAAAG ATGTGGCTGC TTATAAAATG AAGCACCATC TGCCGATAGA GGATTTCACA
CGTGAACAAA ATGTTTTTGC CGAGGCTGAA GAAGAAGCGA AAAATAACGG TCTGGACCCG
CATTCGATAA CCCCTTTTAT TCGTTCGCTA ATGGATGCCA GTAAAGCGAT ACAGTACCGC
TATTTAGCGC AGTGGCGAAT CGGCTCAGAA CCCTCCTTTC CGATACAAAC CTTGTCGGTC
ACCCGGCAAC GTATTCGACA ACTTGATAAT CAAATGTTGA TCATTATCAG CCAGCGCTTG
ATGGTCGGCG CTTTCAGCCA CGACGATATG GTGTGGCTGA GAGCGCAGTT TAATGCGCCG
AATCTGAATG AGAGCGATAT CAGTGATGTG TTGGCAGCCT TATCTTTGGT GCGACGCGCG
CGTTAA
 
Protein sequence
MIRHIAIFLC SLLMCSTTFA DSVTSVSLGA LLTALNERML LMKDVAAYKM KHHLPIEDFT 
REQNVFAEAE EEAKNNGLDP HSITPFIRSL MDASKAIQYR YLAQWRIGSE PSFPIQTLSV
TRQRIRQLDN QMLIIISQRL MVGAFSHDDM VWLRAQFNAP NLNESDISDV LAALSLVRRA
R