Gene SeHA_C1387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1387 
Symbol 
ID6490434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp1353231 
End bp1354079 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content47% 
IMG OID642741621 
Productputative transcriptional regulator 
Protein accessionYP_002045268 
Protein GI194447918 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00489991 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value0.361581 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACTT TTAGTATTAG CGCAATGGCG GCGCAGTGTG GTGTCACAAC AGCAAATATC 
AGGTCCTGGG AACGCTATGG CCTGCTTCAA CCTACCAAAG ATGAAGCTGG CAATCGTTTT 
TATTGCATAG AAGATGCTAT CAGAATACAG CATATTATCG ACGCGTTAAG CAAAGGCTTC 
TCATTAAAAG AGATTAAACC TGCCCTCTAT GGTGAAGAAA CGCATTGCCG CTCGGGATGG 
TTATTCTACC AGGAAGAGAT TTTAGCGCAG TGTAGAAAAT TCGAACCCGC CAAATTGCGA 
AAATTACTCT GGCGTTATGG TCGGGAAATT CCGCCGTGTA TCGTCATTGA GTCAATACTG 
CGTCCTTTAC GGCTGTGGTT GTCCGCAGGC GATGATGATG CACGCCGATT TGAAAAGGCA 
TTACTGGATA CTGCGATTAT TGAATACGCC ACATTCCAGC TAAGTAGCGT ACGAAAGGCG 
CCAGCAGGCA CAATGCTTAT TGCTGCGTTT TCGCTGAACG ACCCCATTGA GCTATGGCTG 
GAAACGATTA AATATTGTAG TGAAGGTATG CGAGTTGAAG TCATCCCCTG GCAGGCGCCG 
ATGCCCGATC TTTTATCAAC GTCTTTCGAG CATATTGTTC TGTGGCATGA TGAGACATTA 
ACTCCCGCGC AGGAAAATCT TATTCAGGCT TTAAAAGAAT CGGGTAAATT TAGTCTTCAT 
GTGAAAAATG GCTCAGGCTT AACATTACTG CCAGCCGTAT ACCGGCAGCA TGAGATGCCG 
GAAAGCATGC AGCATGTTGC ACCGCAAATC CATGCAAACG GCTACGAAAA ATCAGGCACC 
GCACGTTGA
 
Protein sequence
MATFSISAMA AQCGVTTANI RSWERYGLLQ PTKDEAGNRF YCIEDAIRIQ HIIDALSKGF 
SLKEIKPALY GEETHCRSGW LFYQEEILAQ CRKFEPAKLR KLLWRYGREI PPCIVIESIL 
RPLRLWLSAG DDDARRFEKA LLDTAIIEYA TFQLSSVRKA PAGTMLIAAF SLNDPIELWL 
ETIKYCSEGM RVEVIPWQAP MPDLLSTSFE HIVLWHDETL TPAQENLIQA LKESGKFSLH 
VKNGSGLTLL PAVYRQHEMP ESMQHVAPQI HANGYEKSGT AR