Gene SeHA_C1379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1379 
Symbol 
ID6490227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1347568 
End bp1348365 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content55% 
IMG OID642741613 
ProductABC nickel/di-oligopepetide transporter, ATP binding subunit 
Protein accessionYP_002045261 
Protein GI194450604 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value0.413827 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAGTT TACAACAGGT TACGCTGGAA AGCGCGCGTT ATCGCTGGTA TGGCACGAGA 
CGCTGGTCGC CGTTATTACA GAATGTCTCT TTTGATATCG CACCCGGCGA AATGGTGGCA
TTGGTTGGCG GCAGCGGGGA GGGAAAAAGT CTGCTGCTGC AATGCCTGCT CGATCTGCTG
CCGGAAAACT TACGCTTTCG GGGGGAGATT ACGCTTGATG GCAACCGGCT GGACAGACAT
ACCATCAGGC AGCTTAGGGG CAATACGTTT AGCTACGTGC CGCAGGGGGT ACAGGCGCTT
AATCCCATGC TGAATATCAG AAAACATTTG AACAGAGCAT GTCATCTGAC CGGACGCGCC
TGGGATGAGA CGCAGATGGT ACAGCTATTA CAGCAAAGCG ATCTTGAACC GACAGTCCTG
GAACGCTTTC CCCGCCAGCT CTCTGGCGGG ATGGCTAAAC GAATTCTGGC GTGCCACGCC
TCGCTCAGCC AGGCACGTTA TATTTTCGCG GATGAGATCA CCGCCTGGCT TGATACCGCA
CTGGCAAACC AGTTGCTTGA GCACTTGCGA GGTCTCTGCG GGCGGGGATG CGGCGTGCTG
TGGGTGACTC ATGACCTGCT GCTGGCGGCG CGGTATGCCG ATCGCATTGT GGCGCTGCAT
CAGGGTTATA TCACGGACAA TATCCGCTGC GAGCAGTTAC AGCCGGAAAA GATGAGTGAA
CCGTTAAAAC GGCAATGGCA AGCATTGCCT GAACTAAACC CGTTATTTAT GCCGACCGGA
GAGGGAATAG AATGCTAA
 
Protein sequence
MLSLQQVTLE SARYRWYGTR RWSPLLQNVS FDIAPGEMVA LVGGSGEGKS LLLQCLLDLL 
PENLRFRGEI TLDGNRLDRH TIRQLRGNTF SYVPQGVQAL NPMLNIRKHL NRACHLTGRA
WDETQMVQLL QQSDLEPTVL ERFPRQLSGG MAKRILACHA SLSQARYIFA DEITAWLDTA
LANQLLEHLR GLCGRGCGVL WVTHDLLLAA RYADRIVALH QGYITDNIRC EQLQPEKMSE
PLKRQWQALP ELNPLFMPTG EGIEC