Gene SeHA_C1327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1327 
Symbol 
ID6489004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand- 
Start bp1300891 
End bp1301526 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content55% 
IMG OID642741562 
ProductTetR family transcriptional regulator 
Protein accessionYP_002045212 
Protein GI194451905 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.0000128792 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAACGG ATACCACGAG TTGCGCGAAG AAAAGCCGTG GCCGACCAAA AGTGTTCGAC 
AGGGAAGCCG CGCTTGATAA GGCCATGACT CTCTTCTGGC AGCACGGCTA TGAAGCAACT 
TCGCTTGCCG ATCTCGTAGA GGCTACCGGG GCGAAAGCGC CTACTCTCTA TGCGGAATTT 
ACTAACAAAG AAGGATTATT TCGCGCTGTC CTGGATCGCT ACATCACTCG CTTTGCCTCA 
AAGCACGAAG CCCAGCTCTT TTGTGAAGAG AAAAGCGTGG AATCGGCGCT GGAAGATTAC 
TTCACAGAAA TTGCCGCCTG CTTTACCAGT ACAGACACGC CGGCTGGCTG CTTTATGATT 
AATACGTCCG CCACCCTCGC CGCCTCCTCG CGCGATATCG CCCGCACGGT AAAATCACGC 
CACGCCATGC AGGAACAGAC GCTCATCCAG TTTCTGCGCC AACGTCAGGA GCGCGGTGAA 
ATTCCGGCGC ACTGTAACCC GCAGGCGCTC GCGGAATATA TAAACTGTAT TTTACAGGGA 
ATGTCGATCA GCGCCCGCGA GGGAGCCACC TTCGAACAAC TGATGCAAAT TACGCGTACG 
ACTCTGCGCA TCTGGCCTGA ACTGCTCAAG CCCTGA
 
Protein sequence
MTTDTTSCAK KSRGRPKVFD REAALDKAMT LFWQHGYEAT SLADLVEATG AKAPTLYAEF 
TNKEGLFRAV LDRYITRFAS KHEAQLFCEE KSVESALEDY FTEIAACFTS TDTPAGCFMI 
NTSATLAASS RDIARTVKSR HAMQEQTLIQ FLRQRQERGE IPAHCNPQAL AEYINCILQG 
MSISAREGAT FEQLMQITRT TLRIWPELLK P