Gene SeHA_C1322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1322 
SymbolthiK 
ID6488673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1296113 
End bp1296937 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content57% 
IMG OID642741557 
Productthiamine kinase 
Protein accessionYP_002045207 
Protein GI194450936 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0510] Predicted choline kinase involved in LPS biosynthesis 
TIGRFAM ID[TIGR02721] thiamine kinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.209926 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.00000837318 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCGGTCCA ACAACAATAA TCCCTTAACG CGCGACGAGA TCCTGTCGCG CTATTTTCCC 
CAGTATCGTC CCGCCGTCGC CGCATCGCAG GGGCTAAGCG GCGGGAGCTG TATTATTGCC
CACGATACTC ACCGTGTCGT GCTGCGCCGT CATCACGACC CCGACGCTCC ACCAGCCCAT
TTTTTACGTC ATTACCGCGC CTTATCCCAA TTGCCAGCCA GTCTTGCGCC GCGAGCGCTT
TTTTATACGC CAGGCTGGAT GGCGGTAGAA TATCTGCATG GTGTGGTAAA TTCCGCTCTG
CCAGATGCCG ACGAACTGGC GGCCTTACTG TATCATTTGC ATCAACAGCC GCGTTTTGGC
TGGCGTATTG CGCTATCGCC ACTATTGGCG CAGTACTGGT CGTGTTGCGA TCCGGCAAGG
CGTACGCCGT TTTGGTTGCG GCGGCTCAAA CAGTTGCAAA AAAACGGTGA ACCTCGCCCG
CTTCGGCTCG CGCCTTTGCA TATGGATGTC CATGGCGACA ATATAGTATT AACGTCCGCC
GGGTTGAGAC TGATTGACTG GGAGTATGCC GGCGACGGCG ATATTGCGTT GGAGCTGGCG
GCAGTATGGG TTGAGGATGA ACGCCAGCAC CGACAACTGG CAGACGCTTA TGCCGCGCGC
GCGCGAATCG ACGCCCGGCA GCTTTGGCGA CAGATACGAT TATGGCACCC CTGGGTCATT
ATGCTAAAAG CAGGGTGGTT CGAATACCGC TGGCGACAAA CCGGCGAGCA ACAATTTATC
AGGCTGGCCG ATGAAACCTG GCGCCAGTTA CGTATGAAAG GATAA
 
Protein sequence
MRSNNNNPLT RDEILSRYFP QYRPAVAASQ GLSGGSCIIA HDTHRVVLRR HHDPDAPPAH 
FLRHYRALSQ LPASLAPRAL FYTPGWMAVE YLHGVVNSAL PDADELAALL YHLHQQPRFG
WRIALSPLLA QYWSCCDPAR RTPFWLRRLK QLQKNGEPRP LRLAPLHMDV HGDNIVLTSA
GLRLIDWEYA GDGDIALELA AVWVEDERQH RQLADAYAAR ARIDARQLWR QIRLWHPWVI
MLKAGWFEYR WRQTGEQQFI RLADETWRQL RMKG