Gene SeHA_C1316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1316 
Symbol 
ID6490106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1289619 
End bp1290416 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content53% 
IMG OID642741551 
Productputative metallodependent hydrolase 
Protein accessionYP_002045201 
Protein GI194451700 
COG category[L] Replication, recombination and repair 
COG ID[COG0084] Mg-dependent DNase 
TIGRFAM ID[TIGR00010] hydrolase, TatD family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.211046 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.00000000025238 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTTTTAG TCGACTCACA CTGCCATCTT GATGGTCTGG ATTATCAATC TTTGCATAAG 
GACGTGGACG ATGTGCTGGC GAAAGCCGCC GCGCGCGATG TGAAGTTCTG TTTAGCGGTA
GCGACGACGC TGCCGGGGTA TCGCCATATG CGCAAGCTGG TGGGCAAGCG CGATAATGTG
GTCTTTTCCT GCGGCGTGCA TCCGTTAAAT CAGGATGAAG CATATGACGT AGAAGAACTG
CGCCTCCTTG CTGCAGAAGA CGATGTGGTG GCGATGGGCG AGACCGGGCT TGATTACTTT
TACACGCCTG AGACCAAAAT CCGCCAGCAG GCGTCTTTTA TTCATCATAT CCAGATTGGC
CGCGAATTGC ATAAACCGGT GATTGTCCAT ACTCGCGACG CGCGTGCCGA TACGCTGGCT
ATCCTGCGCG AAGAAAAAGT GACGGATTGC GGCGGCGTAC TACACTGTTT TACAGAAGAC
AGAGAAACGG CCGGCAAATT GTTGGATCTG GGGTTTTATA TCTCTTTTTC CGGCATCGTA
ACGTTCCGTA ACGCTGAACA GTTGCGTGAT GCGGCGCGCT ATGTGCCGCT GGATCGGTTA
TTAGTCGAGA CCGATTCTCC TTATCTGGCG CCGGTGCCGC ATCGCGGTAA AGAGAACCAG
CCTGCGATGG TACGCGACGT CGCAGAATAT ATGGCGGTAT TGAAAGGAGT TGCCGTTGAA
GAACTGGCGC AGATCACCAC CGATAACTTT GCTCGCCTGT TCCATATTGA CGCGTCTCGC
CTGTCATCAA TCCGTTAA
 
Protein sequence
MFLVDSHCHL DGLDYQSLHK DVDDVLAKAA ARDVKFCLAV ATTLPGYRHM RKLVGKRDNV 
VFSCGVHPLN QDEAYDVEEL RLLAAEDDVV AMGETGLDYF YTPETKIRQQ ASFIHHIQIG
RELHKPVIVH TRDARADTLA ILREEKVTDC GGVLHCFTED RETAGKLLDL GFYISFSGIV
TFRNAEQLRD AARYVPLDRL LVETDSPYLA PVPHRGKENQ PAMVRDVAEY MAVLKGVAVE
ELAQITTDNF ARLFHIDASR LSSIR