Gene SeHA_C1314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1314 
Symboltmk 
ID6489202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1287966 
End bp1288607 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content58% 
IMG OID642741549 
Productthymidylate kinase 
Protein accessionYP_002045199 
Protein GI194450656 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.000000000000054513 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCAGTA ATTATATCGT CATCGAGGGC CTGGAAGGCG CCGGAAAAAC CACTGCGCGC 
GACGTGGTGG TGGAGACCCT TGAGCAACTG GGTATTCGTA ATATGATTTT TACCCGAGAG
CCGGGCGGGA CGCAACTTGC CGAAAAACTA CGAAGTCTGG TGCTGGATAT CCGATCGGTA
GGCGACGAAG TGATTACCGA TAAAGCGGAA GTGCTGATGT TTTATGCCGC TCGCGTACAG
CTCGTCGAAA CGGTAATCAA ACCCGCGCTG GCGCAAGGCA TATGGGTGAT CGGCGATCGC
CACGATCTCT CGACACAGGC GTATCAGGGG GGAGGGCGCG GCATTGATCA AACCATGCTG
GCGACACTAC GCGATGCCGT GCTGGGCGAT TTTCGTCCTG ACCTGACGCT GTATCTGGAT
GTCACGCCGG AAGTCGGGCT AAAACGCGCC AGAGCGCGCG GCGATTTGGA TCGCATTGAG
CAGGAATCTT TTGATTTCTT TAACCGGACT CGCGCGCGCT ATCTGGAACT GGCGGCGCAA
GACTCGCGTA TCCGCACCAT TGACGCGACC CAGCCGCTGG ATGCCGTCAT GCGCGACATT
CGCGCCACGG TGACGAAGTG GGTGCAGGAG CAAGCGGCAT GA
 
Protein sequence
MGSNYIVIEG LEGAGKTTAR DVVVETLEQL GIRNMIFTRE PGGTQLAEKL RSLVLDIRSV 
GDEVITDKAE VLMFYAARVQ LVETVIKPAL AQGIWVIGDR HDLSTQAYQG GGRGIDQTML
ATLRDAVLGD FRPDLTLYLD VTPEVGLKRA RARGDLDRIE QESFDFFNRT RARYLELAAQ
DSRIRTIDAT QPLDAVMRDI RATVTKWVQE QAA