Gene SeHA_C1306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1306 
SymbolplsX 
ID6490290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1280495 
End bp1281574 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content54% 
IMG OID642741541 
Productputative glycerol-3-phosphate acyltransferase PlsX 
Protein accessionYP_002045191 
Protein GI194451760 
COG category[I] Lipid transport and metabolism 
COG ID[COG0416] Fatty acid/phospholipid biosynthesis enzyme 
TIGRFAM ID[TIGR00182] fatty acid/phospholipid synthesis protein PlsX 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0258051 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0000000000505583 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGACACGTC TAACCCTGGC GTTAGATGTC ATGGGGGGCG ATTTTGGTCC TTCCGTGACG 
GTGCCTGCAG CATTGCAGGC ACTGAACGCT AATTCGCAGC TCACTCTTCT TTTAGTCGGG
AATCCCGATA TTATCACGCC ATTACTTGCC AAAGCTGACT TTGAACAACG TTCGCGTCTG
CAGATTATCC CTGCACAGTC AGTTGTTGCC AGTGATGCCC GGCCTTCGCA GGCGATCCGC
GCCAGTCGCG GGACATCCAT GCGTGTGGCC CTGGAGCTTG TGAAAGAAGG CCGAGCCGAA
GCTTGCGTTA GCGCCGGTAA TACCGGGGCG CTGATGGGGC TGGCGAAATT ATTGCTCAAG
CCTCTTGAGG GGATTGAGCG TCCGGCGTTG GTGACGGTAT TACCGCACCA GCAAAAGGGC
AAAACGGTAG TGCTTGATTT GGGGGCCAAC GTCGACTGTG ACAGTACCAT GCTGGTGCAG
TTTGCCGTGA TGGGCGCCGT TTTGGCGGAA GAGGTCGTCG GGATCAAAAA TCCCCGCGTG
GCGCTACTCA ATATCGGGGA AGAAGAAACC AAAGGCCTCG ACAGTATTCG CGAAGCCTCT
TTAATGTTAA AAACAGTCCC AACCATCAAT TACATCGGCT ACCTTGAGGC GAATGAGTTA
CTGACGGGAA AAACCGATGT ACTGGTGTGT GACGGCTTTA CAGGCAATGT CACACTTAAA
ACGATGGAGG GGGTTGTCAG AATGTTCCTT TCACTGCTGA AATCACAGGG CGAGGGGAAA
AAACGGTCGT GGTGGCTGCT GTTATTAAAA CGTTGGTTAC AAAAAAGCCT GACGAGGCGA
TTCAGTCACC TCAACCCCGA CCAGTATAAT GGCGCCTGTC TGTTAGGATT GCGCGGCACG
GTGATAAAAA GTCATGGTGC GGCCAATCAG CGAGCATTTG CAGTCGCGAT TGAACAGGCA
GTGCAGGCGG TGCAGCGACA AGTTCCTCAG CGAATTGCCG CTCGCCTGGA ATCTGTATAC
CCAGCCGGAT TTGAACCGCT GGACGATGGC AAAGGCGTAA ACCTGCGGGC GCACAGATAA
 
Protein sequence
MTRLTLALDV MGGDFGPSVT VPAALQALNA NSQLTLLLVG NPDIITPLLA KADFEQRSRL 
QIIPAQSVVA SDARPSQAIR ASRGTSMRVA LELVKEGRAE ACVSAGNTGA LMGLAKLLLK
PLEGIERPAL VTVLPHQQKG KTVVLDLGAN VDCDSTMLVQ FAVMGAVLAE EVVGIKNPRV
ALLNIGEEET KGLDSIREAS LMLKTVPTIN YIGYLEANEL LTGKTDVLVC DGFTGNVTLK
TMEGVVRMFL SLLKSQGEGK KRSWWLLLLK RWLQKSLTRR FSHLNPDQYN GACLLGLRGT
VIKSHGAANQ RAFAVAIEQA VQAVQRQVPQ RIAARLESVY PAGFEPLDDG KGVNLRAHR