Gene SeHA_C1290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1290 
SymbolflgF 
ID6488237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1265386 
End bp1266141 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content61% 
IMG OID642741527 
Productflagellar basal body rod protein FlgF 
Protein accessionYP_002045177 
Protein GI194449678 
COG category[N] Cell motility 
COG ID[COG4787] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02490] flagellar basal-body rod protein FlgF
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.670449 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.0203171 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCACG CAATTTATAC CGCCATGGGG GCGGCCAGCC AGACGCTTAA CCAGCAGGCG 
GTAACGGCCA GCAACCTGGC TAATGCCTCA ACGCCGGGCT TTCGCGCGCA GCTTAACGCG
CTACGCGCGG TGCCCGTTGA TGGCCTCTCT TTAGCAACGC GCACGCTGGT TACGGCGTCG
ACGCCCGGGG CGGATATGAC CCCGGGTCAG TTGGACTACA CCTCCCGTCC GCTGGATGTC
GCGTTACAGC AGGACGGCTG GCTGGTAGTG CAAGCGGCGG ATGGCGCTGA AGGATATACC
CGTAACGGGA ATATCCAGGT GGGTCCGACC GGGCAGTTAA CCATTCAGGG ACATCCGGTT
ATCGGCGAAG GCGGCCCGAT TACCGTTCCT GAAGGGTCGG AAATCACCAT TGCGGCAGAC
GGCACGATCT CCGCGCTCAA TCCCGGCGAC CCGCCAAACA CGGTGGCGCC CGTTGGGCGA
CTGAAGCTGG TCAAAGCGGA AGGCAATGAG GTGCAGCGGA GCGATGACGG TTTATTCCGC
CTTACCGCCG AGGCACAGGC TGAACGCGGG GCGGTACTGG CCGCCGACCC GTCAATTCGC
ATTATGTCGG GCGTGCTGGA GGGCAGTAAC GTCAAGCCGG TTGAAGCGAT GACCGACATG
ATCGCCAACG CACGTCGTTT TGAAATGCAG ATGAAGGTTA TCACCAGCGT AGATGAGAAC
GAAGGGCGAG CTAACCAACT GCTGTCGATG AGTTAA
 
Protein sequence
MDHAIYTAMG AASQTLNQQA VTASNLANAS TPGFRAQLNA LRAVPVDGLS LATRTLVTAS 
TPGADMTPGQ LDYTSRPLDV ALQQDGWLVV QAADGAEGYT RNGNIQVGPT GQLTIQGHPV
IGEGGPITVP EGSEITIAAD GTISALNPGD PPNTVAPVGR LKLVKAEGNE VQRSDDGLFR
LTAEAQAERG AVLAADPSIR IMSGVLEGSN VKPVEAMTDM IANARRFEMQ MKVITSVDEN
EGRANQLLSM S