| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C1289 |
|---|
| Symbol | flgE |
|---|
| ID | 6491200 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | + |
|---|
| Start bp | 1264154 |
|---|
| End bp | 1265365 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642741526 |
|---|
| Product | flagellar hook protein FlgE |
|---|
| Protein accession | YP_002045176 |
|---|
| Protein GI | 194449419 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1749] Flagellar hook protein FlgE |
|---|
| TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.209767 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 0.0125362 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTTTT CTCAAGCGGT TAGCGGCCTG AACGCTGCGG CCACCAACCT TGATGTTATC
GGTAATAACA TCGCCAACTC CGCCACCTAT GGCTTTAAGT CCGGTACGGC ATCATTTGCC
GATATGTTCG CCGGTTCCAA AGTGGGGCTG GGCGTAAAAG TGGCGGGGAT TACCCAGGAT
TTTACCGACG GTACGACAAC GAACACCGGG CGCGGGCTGG ATGTCGCGAT TAGCCAGAAC
GGTTTTTTCC GCCTGGTAGA CAGCAACGGT TCCGTGTTCT ATAGCCGCAA CGGCCAGTTC
AAACTGGACG AGAACCGTAA CCTGGTCAAT ATGCAGGGGA TGCAGTTGAC CGGCTATCCG
GCCACCGGTA CGCCGCCGAC CATTCAGCAG GGGGCGAATC CTGCGCCGAT CACCATTCCG
AACACGCTGA TGGCGGCGAA ATCGACCACC ACCGCGTCAA TGCAGATCAA CCTGAACTCA
ACGGACCCTG TACCGTCTAA AACGCCCTTT AGCGTGAGTG ATGCGGATTC GTATAACAAA
AAAGGCACCG TCACCGTTTA TGACAGCCAG GGTAATGCCC ATGACATGAA CGTCTATTTT
GTGAAAACCA AAGATAATGA ATGGGCCGTG TACACCCATG ACAGCAGCGA TCCTGCAGCC
ACAGCGCCGG CGGCACCATC AACCACTCTG GTATTTAACG CAAACGGGAC ACTGCAATCC
GGCGGTACGG TGAACATCAC CACCGGTACG ATTAATGGCG CGACAGCGGC CACCTTCTCC
CTCAGCTTCC TTAACTCCAT GCAGCAGAAC ACCGGGGCTA ACAACATCGT TGCCACCAAT
CAAAACGGCT ATAAGCCGGG CGACCTGGTG AGCTACCAGA TTAACAACGA CGGCACCGTA
GTTGGCAACT ACTCCAACGA GCAGGAGCAG GTGCTGGGGC AGATTGTGCT GGCTAACTTC
GCCAACAACG AAGGTCTGGC ATCCCAGGGC GATAACGTCT GGGCGGCGAC GCAGGCTTCC
GGGGTTGCGC TGCTGGGGAC TGCCGGTTCC GGCAACTTCG GTAAGCTGAC GAACGGCGCG
CTGGAAGCCT CTAACGTGGA TTTGAGTAAA GAGCTGGTGA ATATGATCGT CGCGCAGCGT
AACTACCAGT CGAATGCGCA GACCATCAAA ACCCAGGACC AGATCCTCAA TACGCTGGTT
AACCTGCGCT AA
|
|---|
| Protein sequence | MSFSQAVSGL NAAATNLDVI GNNIANSATY GFKSGTASFA DMFAGSKVGL GVKVAGITQD
FTDGTTTNTG RGLDVAISQN GFFRLVDSNG SVFYSRNGQF KLDENRNLVN MQGMQLTGYP
ATGTPPTIQQ GANPAPITIP NTLMAAKSTT TASMQINLNS TDPVPSKTPF SVSDADSYNK
KGTVTVYDSQ GNAHDMNVYF VKTKDNEWAV YTHDSSDPAA TAPAAPSTTL VFNANGTLQS
GGTVNITTGT INGATAATFS LSFLNSMQQN TGANNIVATN QNGYKPGDLV SYQINNDGTV
VGNYSNEQEQ VLGQIVLANF ANNEGLASQG DNVWAATQAS GVALLGTAGS GNFGKLTNGA
LEASNVDLSK ELVNMIVAQR NYQSNAQTIK TQDQILNTLV NLR
|
|---|
| |