Gene SeHA_C1280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1280 
Symbol 
ID6491564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp1257472 
End bp1258119 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content56% 
IMG OID642741517 
Producthypothetical protein 
Protein accessionYP_002045167 
Protein GI194450424 
COG category[S] Function unknown 
COG ID[COG3132] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value0.48257 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATATG AATTAACCGC CACTGAAGCG CGAGTGATTG GCTGTCTGCT GGAAAAGCAG 
GTGACAACGC CGGAACAGTA TCCGCTTTCC GTCAACGGGG TGGTGACAGC CTGTAATCAG 
AAAACCAACC GTGAACCGGT GATGAACCTG ACGGAACAAG AGGTGCAGGA ACAGCTCGAT 
AACCTGGTGA AACGCCACTT TTTGCGTACG GTCAGCGGGT TTGGCAACCG CGTCACCAAA 
TATGAACAGC GCTTCTGTAA TTCCGAATTT GGCGATCTGA AACTTAGCGC GGCGGAAGTG 
GCGCTCGTCA CTACGCTGCT GCTGCGCGGC GCGCAAACGC CCGGCGAGTT GCGTAGCCGG 
GCGTCGCGGA TGCATGAATT CAGCGATATG ACGGAAGTTG AATCCACGCT GGAACGGCTT 
GCCAGTCGTG AGGACGGCCC GTATGTCGTC CGTCTGGCGC GTGAACCGGG TAAGCGCGAA 
AGCCGTTATA TGCACCTTTT TTGCGGCGAC GTCGATGAAC TGTCTCTCCA GACGTCTGCG 
CCGGAAAGTG CGTCGGGCGA TCTTCAGTCG CGCGTCGAAG CGCTGGAAAG CGAAGTGGCG 
GAGTTAAAGC AGCGGCTGGA TTCTTTGTTA GCTCACCTGG GGGAGTAA
 
Protein sequence
MKYELTATEA RVIGCLLEKQ VTTPEQYPLS VNGVVTACNQ KTNREPVMNL TEQEVQEQLD 
NLVKRHFLRT VSGFGNRVTK YEQRFCNSEF GDLKLSAAEV ALVTTLLLRG AQTPGELRSR 
ASRMHEFSDM TEVESTLERL ASREDGPYVV RLAREPGKRE SRYMHLFCGD VDELSLQTSA 
PESASGDLQS RVEALESEVA ELKQRLDSLL AHLGE