| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C1250 |
|---|
| Symbol | |
|---|
| ID | 6489892 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | - |
|---|
| Start bp | 1232374 |
|---|
| End bp | 1233207 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642741487 |
|---|
| Product | curli production assembly/transport component CsgG |
|---|
| Protein accession | YP_002045137 |
|---|
| Protein GI | 194450998 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1462] Uncharacterized protein involved in formation of curli polymers |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 69 |
|---|
| Fosmid unclonability p-value | 0.589697 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCGCT TACTTATTTT GGTTGCCGTT TTATTGTTGA GTGGATGCTT AACTGCCCCG
CCGAAACAAG CTGCGAAACC GACATTAATG CCCCGCGCAC AAAGTTACAA AGATTTGACG
CACTTACCTG CTCCCACCGG TAAGATCTTT GTTTCGGTAT ATAACATTCA GGATGAAACG
GGCCAATTTA AACCTTACCC GGCAAGTAAC TTTTCTACGG CTGTGCCGCA GAGCGCCACC
GCTATGTTGG TCACCGCGCT GAAAGATTCG CGCTGGTTTA TCCCGCTGGA ACGACAAGGC
TTACAGAATC TTTTGAATGA ACGGAAAATT ATTCGCGCAG CCCAGGAAAA CGGCACCGTG
GCGATGAATA ACCGTATCCC GCTTCAGTCG CTGACGGCGG CAAATATTAT GGTGGAAGGT
TCTATTATTG GTTATGAAAG TAACGTCAAA TCCGGCGGGG TCGGCGCAAG ATATTTCGGT
ATTGGCGCCG ATACGCAGTA TCAGCTGGAT CAGATTGCTG TCAACCTGCG CGTGGTTAAC
GTCAGTACGG GCGAGATCCT TTCTTCGGTG AACACCAGTA AAACGATCCT TTCCTATGAA
GTACAGGCAG GCGTGTTCCG TTTTATTGAT TACCAGCGCT TACTGGAAGG CGAAATCGGC
TATACCTCGA ACGAACCGGT GATGCTGTGT CTGATGTCAG CCATTGAAAC CGGCGTTATC
TTCCTCATTA ATGATGGTAT CGATCGCGGA CTGTGGGATT TGCAGAATAA AGCGGACAGG
CAAAATGATA TTCTGGTGAA ATACCGTGAG CTGTCAGTAC CGCCAGAATC CTGA
|
|---|
| Protein sequence | MPRLLILVAV LLLSGCLTAP PKQAAKPTLM PRAQSYKDLT HLPAPTGKIF VSVYNIQDET
GQFKPYPASN FSTAVPQSAT AMLVTALKDS RWFIPLERQG LQNLLNERKI IRAAQENGTV
AMNNRIPLQS LTAANIMVEG SIIGYESNVK SGGVGARYFG IGADTQYQLD QIAVNLRVVN
VSTGEILSSV NTSKTILSYE VQAGVFRFID YQRLLEGEIG YTSNEPVMLC LMSAIETGVI
FLINDGIDRG LWDLQNKADR QNDILVKYRE LSVPPES
|
|---|
| |