Gene SeHA_C1217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1217 
SymbolhpaX 
ID6489813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1198763 
End bp1200139 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content53% 
IMG OID642741456 
Product4-hydroxyphenylacetate permease 
Protein accessionYP_002045107 
Protein GI194449451 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID[TIGR02332] 4-hydroxyphenylacetate permease 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.126319 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA CATCATCTGC ACTTCCGGAA AGCCCCGAGT CTGTCAGTTC GCACAACGCG 
CTCAGCACGG GTCAACAAAC CGTCATAAAT AAACTGTTCC GCCGACTGAT CGTATTTTTA
TTCGTGTTGT TTATCTTCTC GTTTTTAGAC CGTATCAACA TCGGTTTTGC CGGGTTGACG
ATGGGGCAGG ATCTGGGGTT AAGCGCCACC ATGTTTGGCC TTGCCACGAC GCTGTTTTAC
GCCACCTACG TCATTTTCGG CATTCCCAGC AACGTGATGT TGAGCATCGT CGGCGCCCGC
CGCTGGATTG CGACCATTAT GGTGCTATGG GGCATTGCAT CTACCGCCAC GATGTTCGCG
GTGGGACCGA AAAGCCTGTA TGTGCTGCGA ATGCTGGTGG GCATTACCGA AGCGGGCTTT
TTGCCAGGAA TATTGCTCTA TTTAACTTAC TGGTTTCCGG CATTTTTCCG CGCCCGCGCC
AACGCATTAT TTATGATTGC CATGCCGGCC ACTACCGCGT TGGGGTCGAT TGTCTCCGGC
TATATTTTAT CGTTGGACGG CATATTCAAT CTGCATGGAT GGCAGTGGTT ATTCCTGTTG
GAAGGATTTC CGTCAGTTTT GTTAGGCATT ATGGTCTGGT TTTACCTGGA TGATACCCCG
GCAAAAGCCA AATGGCTGAC GGCAGAGGAT AAAAAATGTT TGCAGGAGAT GATGGATAAT
GACCGCCTGA CGCTGGTTCA GCCGGAGGGG GCCATCAGCC ATAACGCCAT GCAGCAGCGT
AGTCTGTGGC GCGAAGTATT CACGCCAATT GTACTGATGT ATACGCTGGC CTATTTTTGC
CTTACCAATA CGCTTAGCGC CATTAGTATC TGGACGCCGC AAATCCTGAA AAGTTTTAAT
GAAGGCAGCA GCAATATCAC CATCGGCCTG CTGGCGGCGA TCCCGCAGAT TTGTACTATT
CTGGGCATGA TTTACTGGAG CCGCCATTCG GACAAGCATC AGGAACGTAA ACATCACACG
GCGTTGCCGT TCCTGTTTGC CGCCGCGGGC TGGCTGCTGG CGTCGGCGAC CGACCATAAC
CTGATCCAGC TCCTGGGGAT CGTGATGGCA TCCACGGGTT CCTTTAGCGC GATGGCGATC
TTCTGGACCA CGCCGGATCA GTCGATCAGT TTACGCGCCA GGGCGATAGG CATTGCGGTC
ATCAATGCCA CCGGCAATAT TGGCTCCGCG CTCAGCCCGT TTATGATTGG CTGGCTAAAA
GATATCACCG GTAGCTTCAA TAGCGGACTC TGGTTTGTCG CTTCTCTGTT AGTCGTCGGC
GCCGCCATTA TCTGGCTCAT TCCCATGAAA GCATCGCGTC CGCGCGCCAC CCCTTGA
 
Protein sequence
MSDTSSALPE SPESVSSHNA LSTGQQTVIN KLFRRLIVFL FVLFIFSFLD RINIGFAGLT 
MGQDLGLSAT MFGLATTLFY ATYVIFGIPS NVMLSIVGAR RWIATIMVLW GIASTATMFA
VGPKSLYVLR MLVGITEAGF LPGILLYLTY WFPAFFRARA NALFMIAMPA TTALGSIVSG
YILSLDGIFN LHGWQWLFLL EGFPSVLLGI MVWFYLDDTP AKAKWLTAED KKCLQEMMDN
DRLTLVQPEG AISHNAMQQR SLWREVFTPI VLMYTLAYFC LTNTLSAISI WTPQILKSFN
EGSSNITIGL LAAIPQICTI LGMIYWSRHS DKHQERKHHT ALPFLFAAAG WLLASATDHN
LIQLLGIVMA STGSFSAMAI FWTTPDQSIS LRARAIGIAV INATGNIGSA LSPFMIGWLK
DITGSFNSGL WFVASLLVVG AAIIWLIPMK ASRPRATP