| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C1177 |
|---|
| Symbol | |
|---|
| ID | 6492335 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | - |
|---|
| Start bp | 1163220 |
|---|
| End bp | 1164980 |
|---|
| Gene Length | 1761 bp |
|---|
| Protein Length | 586 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642741418 |
|---|
| Product | protease La-like protein |
|---|
| Protein accession | YP_002045070 |
|---|
| Protein GI | 194451653 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1067] Predicted ATP-dependent protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00123977 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 69 |
|---|
| Fosmid unclonability p-value | 0.54103 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACCATTA CGAAACTTGC ATGGCGTGAT CTGGTTCCGG ATAGCGAAAG CTATCAGGAG
ATATTTGCAC AGCCACACGC GACTGACGAA AACGACACCT TACTCAGTGA TACTCAGCCA
CGACTGCAAT TTGCGCTTGA GCAACTTATA CAGCCGTGGG CATCATCCTC TTTTATGCTG
ACTAAAGCGC CTGAAGAGCA AGAGTATCTC ACTTTACTTT CAGATGCCGT CCGCGCTCTG
CAAACCGATG CCGGACAATT AACCGGCGGA CATTATGACG TTTCCGGGCA TACTGTTCAT
TACCGCGCCG CGCAGAATGC GCAAGACAAC TTTGCCACCG TCACACAAGT CGTCAGCGCG
GACTGGGTCG AAGCCGAACA GCTCTTTGGT TGCCTGCGGC AGTATAACGG CGACATTACC
CTGCAGCCGG GACTGGTTCA TCAGGCAAAC GGCGGCGTGC TGATTATTTC CTTACGAACC
CTTCTGGCGC AGCCGTTACT ATGGATGCGT CTGAAAGCCA TCGTTAGCCG CGAGCGTTTT
GACTGGGTGG CCTTTGACGA GTCGCGTCCA TTACCGGTCT CCGTGCCATC AATGCCGCTC
AAACTGAAGG TGATTCTGGT TGGCGAACGT GAATCACTGG CTGATTTTCA GGAGATGGAA
CCGGAGCTCG CGGAACAGGC TATCTACAGT GAATTTGAAG ACAATTTACA GATAGCGGAC
GCAGAAGCTA TGACCCTGTG GTGTCAATGG GTGACGCGTA TCGCTTTACG CGATAATTTG
CCGCCCCCGG CACCGGATGC CTGGCCCGTT CTGATACGCG AGGCTGTGCG CTATACCGGC
GAACAGGATA CGCTGCCTCT TTGCCCACTG TGGATAGCCC GCCAGTTTAA GGAGGCATCG
CCTTTATGCG AAGGCGATAC CTGCGGCGCA GAAGCGCTCA GTCTGATGCT TGCCCGACGC
GAATGGCGAG AAGGCTTTCT GGCGGAACGG ATGCAGGATG AGATTCTGCA AGAGCAGATC
CTGATTGAAA CCGAAGGCGA ACGCGTTGGA CAAATCAATG CGCTTTCCGT CATTGAGTTT
CCCGGGCATC CTCGCGCCTT TGGCGAACCG TCGCGAATTA GCTGTGTTGT GCATATCGGC
GATGGCGAAT TTAATGATAT TGAGCGCAAG GCCGAACTTG GCGGAAATAT CCACGCTAAG
GGAATGATGA TTATGCAGGC CTTCCTGATG TCGGAGTTGC AGCTGGAGCA ACAAATTCCC
TTCTCTGCCT CGTTAACCTT TGAGCAGTCC TACAGCGAAG TGGATGGCGA TAGCGCCTCA
ATGGCGGAAT TATGTGCGCT CATCAGCGCA CTGGCCAATG TGCCAGTGAA TCAAAATATT
GCGATTACCG GCTCGGTCGA TCAGTTTGGT CGCGCGCAAC CGGTGGGCGG GCTAAACGAA
AAAATTGAAG GTTTCTTCGC CATCTGCGAG CAGCGGGAAT TAAACGGTAA ACAGGGCGTG
ATTATCCCTG CCGCCAATGT CCGCCATCTC AGTCTTAAAT CTGAACTGCT GCAAGCGGTT
AAAGAAGAGA AGTTCACTAT CTGGGCGGTA GACGACGTGA CCGACGCCTT ACCGCTACTG
TTAAATCTGG TGTGGGATGG CGAAGGTCAA ACGACGTTGA TGCAGACTAT CCAGGAGCGT
ATCGCGCAGG CGACGCAACA GGAAGGCCGT CATCGTTTCC CGTGGCCATT ACGTTGGCTG
AACGCTTTTA TTCCGAACTG A
|
|---|
| Protein sequence | MTITKLAWRD LVPDSESYQE IFAQPHATDE NDTLLSDTQP RLQFALEQLI QPWASSSFML
TKAPEEQEYL TLLSDAVRAL QTDAGQLTGG HYDVSGHTVH YRAAQNAQDN FATVTQVVSA
DWVEAEQLFG CLRQYNGDIT LQPGLVHQAN GGVLIISLRT LLAQPLLWMR LKAIVSRERF
DWVAFDESRP LPVSVPSMPL KLKVILVGER ESLADFQEME PELAEQAIYS EFEDNLQIAD
AEAMTLWCQW VTRIALRDNL PPPAPDAWPV LIREAVRYTG EQDTLPLCPL WIARQFKEAS
PLCEGDTCGA EALSLMLARR EWREGFLAER MQDEILQEQI LIETEGERVG QINALSVIEF
PGHPRAFGEP SRISCVVHIG DGEFNDIERK AELGGNIHAK GMMIMQAFLM SELQLEQQIP
FSASLTFEQS YSEVDGDSAS MAELCALISA LANVPVNQNI AITGSVDQFG RAQPVGGLNE
KIEGFFAICE QRELNGKQGV IIPAANVRHL SLKSELLQAV KEEKFTIWAV DDVTDALPLL
LNLVWDGEGQ TTLMQTIQER IAQATQQEGR HRFPWPLRWL NAFIPN
|
|---|
| |