Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C1148 |
Symbol | |
ID | 6491444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 1129328 |
End bp | 1130077 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642741390 |
Product | gifsy-2 prophage VmtV |
Protein accession | YP_002045042 |
Protein GI | 194450076 |
COG category | [N] Cell motility |
COG ID | [COG5492] Bacterial surface proteins containing Ig-like domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.781355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 79 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGACA CGACAATTCC TAATCCACTT GCGCCGGTAA AAGGCGCAAA TACCACATTC TGGATGTACA ACAGCGAGGG TGATCCGTTC GCCAGCCCGC TAAGTGATAA TAACTGGCTG AGGCTGGCAA ACGTAAAAGA CCTGCAGCCG GGAGAACTGA CGGCAGATGC AGAAGATAAT AACTATCTTG ATGACGAGAA CGCTGACTGG AAAAGTACCA CACAGGGACA GAAGTCTGCC GGGGATACTT CTGTGACGCT GGCGTGGAAG CCAGGTGAGG ACGTACAGAA AAAGCTTATT CAACTGTTCA CGACCGGGCA GAAGCGCGGA TTCCGGATCA AGTATCCGAA CGGCACTGTT GATGTGTTCA GAGGCTGGGT GAGCTCGCTG GGGAAAACGG TGCAGAGTAA GGATGAGATC GCCCGTACAG TAAAAATTAC CAGTGTGGGC CGTCCGTACA TTGCTGAAGA GGATGCACCG GAAGTGGTTA GTGTTACCGG ACTGACAGTG GAACCGACAA ATGCCACCGT GAAGGTCGGC GCCACAACAG CGGTTACGTT CACGGTGAAA CCGGATAACG TGACAGATAA ATCACTGCGT ATCGCAACGT CAGATCCGAC TACAGCCACC GTCACGCAGG CGGAAAATAT TGCCACTGTA AAAGGTGTTA AGGCAGGTAC AGTGAAAATT ATTGGCATGA CAACAGACGG TAATTTTACC GCTATTGCGG ATATTACTGT TCAGGCATAA
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Protein sequence | MTDTTIPNPL APVKGANTTF WMYNSEGDPF ASPLSDNNWL RLANVKDLQP GELTADAEDN NYLDDENADW KSTTQGQKSA GDTSVTLAWK PGEDVQKKLI QLFTTGQKRG FRIKYPNGTV DVFRGWVSSL GKTVQSKDEI ARTVKITSVG RPYIAEEDAP EVVSVTGLTV EPTNATVKVG ATTAVTFTVK PDNVTDKSLR IATSDPTTAT VTQAENIATV KGVKAGTVKI IGMTTDGNFT AIADITVQA
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