Gene SeHA_C1148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1148 
Symbol 
ID6491444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1129328 
End bp1130077 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content51% 
IMG OID642741390 
Productgifsy-2 prophage VmtV 
Protein accessionYP_002045042 
Protein GI194450076 
COG category[N] Cell motility 
COG ID[COG5492] Bacterial surface proteins containing Ig-like domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.781355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACA CGACAATTCC TAATCCACTT GCGCCGGTAA AAGGCGCAAA TACCACATTC 
TGGATGTACA ACAGCGAGGG TGATCCGTTC GCCAGCCCGC TAAGTGATAA TAACTGGCTG
AGGCTGGCAA ACGTAAAAGA CCTGCAGCCG GGAGAACTGA CGGCAGATGC AGAAGATAAT
AACTATCTTG ATGACGAGAA CGCTGACTGG AAAAGTACCA CACAGGGACA GAAGTCTGCC
GGGGATACTT CTGTGACGCT GGCGTGGAAG CCAGGTGAGG ACGTACAGAA AAAGCTTATT
CAACTGTTCA CGACCGGGCA GAAGCGCGGA TTCCGGATCA AGTATCCGAA CGGCACTGTT
GATGTGTTCA GAGGCTGGGT GAGCTCGCTG GGGAAAACGG TGCAGAGTAA GGATGAGATC
GCCCGTACAG TAAAAATTAC CAGTGTGGGC CGTCCGTACA TTGCTGAAGA GGATGCACCG
GAAGTGGTTA GTGTTACCGG ACTGACAGTG GAACCGACAA ATGCCACCGT GAAGGTCGGC
GCCACAACAG CGGTTACGTT CACGGTGAAA CCGGATAACG TGACAGATAA ATCACTGCGT
ATCGCAACGT CAGATCCGAC TACAGCCACC GTCACGCAGG CGGAAAATAT TGCCACTGTA
AAAGGTGTTA AGGCAGGTAC AGTGAAAATT ATTGGCATGA CAACAGACGG TAATTTTACC
GCTATTGCGG ATATTACTGT TCAGGCATAA
 
Protein sequence
MTDTTIPNPL APVKGANTTF WMYNSEGDPF ASPLSDNNWL RLANVKDLQP GELTADAEDN 
NYLDDENADW KSTTQGQKSA GDTSVTLAWK PGEDVQKKLI QLFTTGQKRG FRIKYPNGTV
DVFRGWVSSL GKTVQSKDEI ARTVKITSVG RPYIAEEDAP EVVSVTGLTV EPTNATVKVG
ATTAVTFTVK PDNVTDKSLR IATSDPTTAT VTQAENIATV KGVKAGTVKI IGMTTDGNFT
AIADITVQA