Gene SeHA_C1088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1088 
Symbol 
ID6492282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand- 
Start bp1080884 
End bp1081660 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content56% 
IMG OID642741330 
Producthypothetical protein 
Protein accessionYP_002044982 
Protein GI194447573 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.213248 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value0.252564 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTTTA CGCTAAAGAA AGTGATTGGC GGTATGTTAT TGCCGCTTCC GCTGATGTTG 
CTAATCATTG GCGTTGGCCT GGCGCTGCTC TGGTTTAGCC GCTTTCAGAA GACCGGAAAA 
GTATTTATCA GCGTAGGTTG GCTGGCGCTA TTGCTATTAA GCCTGCAACC CGTCTCTGAC 
CATCTGCTGC GTCCGATAGA AAACCGCTAC CCTACCTGGC AGGGTCCGCA AAAGGTGGAA 
TATATTGTGG TTCTCGGCGG CGGCTATACC TGGAACCCGC AGTGGGCGCC GAGCTCTAAT 
TTAATTAACA ACAGCTTGCC GCGGCTGGCG GAAGGCATTC GACTGTGGCG CGCGAATCCG 
GGAGCCAGGC TGATTTTTAC CGGCGGCGTA GCAAAAACCA ATACGGTAAG CACGGCGGAG 
GTCGGTGCGC GGGTGGCGCA GTCGCTGGGC GTACCGCGTA GCGATATTAT TACGCTGGAT 
AAACCAAAAG ATACGGAAGA AGAAGCCGCC GCCGTTAAGC AGGCCATCGG CGACGCCCCT 
TTCCTGCTGG TAACCTCCGC CTCGCATTTG CCGCGTGCGA TGATTTTCTT TCAGCATGCC 
GGGCTGAATC CGCTTCCCGC GCCGGCGAAT CAGTTGGCGA TCGATTCGCC GCTCAATCCC 
TGGGAGCGGG CAATTCCGTC CCCGGTCTGG CTGATGCACA GCGATCGCGC TGGGTATGAA 
ACATTAGGGC GACTTTGGCA ATGGCTGAAA GGCATATCAG GCAAGCCAGG GGAGTAA
 
Protein sequence
MLFTLKKVIG GMLLPLPLML LIIGVGLALL WFSRFQKTGK VFISVGWLAL LLLSLQPVSD 
HLLRPIENRY PTWQGPQKVE YIVVLGGGYT WNPQWAPSSN LINNSLPRLA EGIRLWRANP 
GARLIFTGGV AKTNTVSTAE VGARVAQSLG VPRSDIITLD KPKDTEEEAA AVKQAIGDAP 
FLLVTSASHL PRAMIFFQHA GLNPLPAPAN QLAIDSPLNP WERAIPSPVW LMHSDRAGYE 
TLGRLWQWLK GISGKPGE