Gene SeHA_C1084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1084 
Symbol 
ID6490325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp1077591 
End bp1078823 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content56% 
IMG OID642741326 
Producthypothetical protein 
Protein accessionYP_002044978 
Protein GI194450918 
COG category[S] Function unknown 
COG ID[COG3214] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.048603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.227981 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTGC CGTACCTTTC TCTTTCCCAG GCCCGGTGTC TTCACCTTGC TGCGCAGGGG 
CTATTGAAAA AGCCGCGCCG TAACGCGATG TCTGGCGATG TTCTTGCCGC CATCTCACGC 
ATGGCGTTGC TGCAAATTGA TACCATCAAT GTTGTCGCAC GTAGCCCCTA TCTGGTGCTG 
TTTAGCCGTC TCGGTTCGTA CCCGCAGGCC TGGCTGGATG AGGCGCTGCG ACGCGGCGAG 
TTAATGGAAT ACTGGGCGCA TGAGGCCTGT TTCTTACCAC GCCGCGACTT TAAACTTATC 
CGCCATCGTA TGCTGTCGCC GGAAAAGATG GGCTGGAAAT ATCGCGCGGC ATGGATGCAT 
GAGCACGCGG AAGAAATAGA ACAGCTAGTG CGGCATATTC AGGAGCACGG TCCAGTGCGT 
TCTGCCGATT TTGAACATGC GCAGAAAGGC GTCAGCGGCT GGTGGGAATG GAAACCACAT 
AAACGCCACC TTGAGGGTTT ATTTACCGCC GGAAAAGTCA TGGTTGTTGA GCGGCGTAAT 
TTTCAACGTG TATATGATTT AACGCGCCGT GTGATGCCGC ACTGGGATGA TGAACGAGAT 
GGACTGTCAC AGTCGCAGGC GGAAAGCCTG ATGCTGGATA ATAGCGCGCG CAGTCTGGGG 
ATTTTCCGTG AACAGTGGCT GGCGGATTAC TACCGCCTGA AACGTCCTGA CCTGAAGGGA 
TGGCGGGAGA GCCGGGCGGA ACAGCAGCAG ATTATTCCGG TCGAGGTGGA AACGTTGGGG 
CGGATGTGGC TTCATGCCGA TCTTCTTTCG CAGCTTGAAC CGGCGCTAAA TAACGCCTTA 
AAGGCGACCC ATAGCGCAGT ACTGTCGCCT TTCGATCCTG TGGTATGGGA TCGCAAGCGG 
GCAGCGCAGC TCTTCGCATT CGACTACCGG CTGGAATGTT ATACGCCCGC GGCGAAGCGC 
CAGTACGGTT ATTTTGTGCT GCCGTTATTA TACCGGGGCC GTTTAGTCGG GCGAATGGAT 
GCCAAAATGC ACCGTAAAAC CGGGGTGCTT GAGGTTATCT CGCTGTATCT GGAGGACGAT 
ATTCGCCCTG GCGTTAGTCT GCAAAAAGGA ATCTGGCAGG CCATTAGCGC GTTTGCTGCC 
TGGCAACGAG CATCGCGCGT GACGCTGGGA CAATGTCCGC CAGGCCTGTT TAGCGCCATG 
CGTCATGGCT GGGAAATAGA CCCTGCACCC TAA
 
Protein sequence
MSLPYLSLSQ ARCLHLAAQG LLKKPRRNAM SGDVLAAISR MALLQIDTIN VVARSPYLVL 
FSRLGSYPQA WLDEALRRGE LMEYWAHEAC FLPRRDFKLI RHRMLSPEKM GWKYRAAWMH 
EHAEEIEQLV RHIQEHGPVR SADFEHAQKG VSGWWEWKPH KRHLEGLFTA GKVMVVERRN 
FQRVYDLTRR VMPHWDDERD GLSQSQAESL MLDNSARSLG IFREQWLADY YRLKRPDLKG 
WRESRAEQQQ IIPVEVETLG RMWLHADLLS QLEPALNNAL KATHSAVLSP FDPVVWDRKR 
AAQLFAFDYR LECYTPAAKR QYGYFVLPLL YRGRLVGRMD AKMHRKTGVL EVISLYLEDD 
IRPGVSLQKG IWQAISAFAA WQRASRVTLG QCPPGLFSAM RHGWEIDPAP