Gene SeHA_C1076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1076 
SymbolaroA 
ID6492098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1067023 
End bp1068306 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content54% 
IMG OID642741318 
Product3-phosphoshikimate 1-carboxyvinyltransferase 
Protein accessionYP_002044970 
Protein GI194449431 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0128] 5-enolpyruvylshikimate-3-phosphate synthase 
TIGRFAM ID[TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.28186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value0.115677 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCCC TGACGTTACA ACCCATCGCG CGGGTCGATG GCGCCATTAA TTTACCTGGC 
TCCAAAAGTG TTTCAAACCG TGCTTTGCTC CTGGCGGCTT TAGCTTGTGG TAAAACCGTT
CTGACGAATC TGCTGGATAG CGATGACGTC CGCCATATGC TCAATGCCCT GAGCGCGTTG
GGGATCAATT ACACCCTTTC TGCCGATCGC ACCCGCTGTG ATATCACGGG TAATGGCGGC
CCATTACGCG CGTCAGGCGC TCTGGAACTG TTTCTCGGTA ATGCCGGAAC CGCGATGCGT
CCGTTAGCGG CAGCGCTATG TCTGGGGCAA AATGAGATAG TGTTAACCGG CGAACCGCGT
ATGAAAGAGC GTCCGATAGG CCATCTGGTC GATTCGCTGC GTCAGGGTGG GGCGAATATT
GATTACCAGG AGCAGGAAAA CTATCCGCCC CTGCGTCTGC GCGGCGGTTT TACCGGCGGC
GACATTGAGG TTGATGGTAG CGTTTCCAGC CAGTTCCTGA CCGCTCTGCT GATGACGGCG
CCGCTGGCGC CTGAAGACAC AACTATTCGC GTTAAAGGCG AACTGGTATC AAAACCTTAC
ATCGATATCA CGCTAAATTT AATGAAAACC TTTGGCGTGG AGATAACGAA CCATCACTAC
CAACAATTTG TCGTGAAGGG CGGTCAACAG TATCACTCTC CGGGTCGCTA TCTGGTCGAG
GGCGATGCCT CGTCAGCGTC CTATTTTCTC GCCGCCGGGG CGATAAAAGG CGGCACGGTA
AAAGTGACCG GAATTGGCCG CAAAAGTATG CAGGGCGATA TTCGTTTTGC CGATGTGCTG
GAGAAAATGG GCGCGACCAT TACCTGGGGC GATGATTTTA TTGCCTGCAC GCGCGGCGAA
TTGCACGCCA TAGATATGGA TATGAACCAT ATTCCGGATG CGGCGATGAC GATTGCCACC
ACGGCGCTGT TTGCGAAAGG AACCACGACG TTGCGCAATA TTTATAACTG GCGAGTGAAA
GAAACCGATC GCCTGTTCGC GATGGCGACC GAGCTACGTA AAGTGGGCGC TGAAGTCGAA
GAAGGGCACG ACTATATTCG TATCACGCCG CCGGCGAAGC TCCAACACGC GGATATTGGC
ACGTACAACG ACCACCGTAT GGCGATGTGC TTCTCACTGG TCGCACTGTC CGATACGCCA
GTCACGATCC TGGATCCGAA ATGTACCGCA AAAACGTTCC CTGATTATTT CGAACAACTG
GCGCGGATGA GTACGCCTGC CTAA
 
Protein sequence
MESLTLQPIA RVDGAINLPG SKSVSNRALL LAALACGKTV LTNLLDSDDV RHMLNALSAL 
GINYTLSADR TRCDITGNGG PLRASGALEL FLGNAGTAMR PLAAALCLGQ NEIVLTGEPR
MKERPIGHLV DSLRQGGANI DYQEQENYPP LRLRGGFTGG DIEVDGSVSS QFLTALLMTA
PLAPEDTTIR VKGELVSKPY IDITLNLMKT FGVEITNHHY QQFVVKGGQQ YHSPGRYLVE
GDASSASYFL AAGAIKGGTV KVTGIGRKSM QGDIRFADVL EKMGATITWG DDFIACTRGE
LHAIDMDMNH IPDAAMTIAT TALFAKGTTT LRNIYNWRVK ETDRLFAMAT ELRKVGAEVE
EGHDYIRITP PAKLQHADIG TYNDHRMAMC FSLVALSDTP VTILDPKCTA KTFPDYFEQL
ARMSTPA