Gene SeHA_C1072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1072 
Symbol 
ID6491189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1061826 
End bp1062641 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content48% 
IMG OID642741314 
Productputative formate transporter FocA 
Protein accessionYP_002044966 
Protein GI194451469 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2116] Formate/nitrite family of transporters 
TIGRFAM ID[TIGR00790] formate/nitrite transporter 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.4998 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value0.491294 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAAG TGGCTGAAGA AGCAGGCGTC TATAAAGCAA CGAAACATCC GCTTAAGACT 
TTCTATCTGG CGATTACCGC CGGTGTATTC ATTTCAATTG CCTTTGTTTT TTATATTACT
GCGACAACCG GTACTGGCGC GATGCCTTAT GGCATGGCGA AACTTATCGG GGGTATCTGT
TTCTCTTTGG GACTGATTCT CTGTGTTATT TGCGGCGCTG ATCTCTTCAC CTCTACTGTT
CTGATCGTTG TAGCTAAAGC TAGCGGTCGC ATCACCTGGG GGCAACTGGC TAAAAACTGG
TTAAACGTCT ATTTTGGTAA CCTGATTGGC GCTCTGCTTT TCGTGTTACT GATGTGGCTT
TCCGGCGAGT ATATGACTGC CAACGGTCAA TGGGGACTTA ACGTCCTGCA AACCGCCGAC
CACAAAATGC ACCACACTTT TATTGAAGCT GTCTGCCTCG GTATTCTGGC GAACCTGATG
GTTTGTCTGG CCGTGTGGAT GAGCTACTCA GGTCGTAGCC TGATGGACAA AGCGTTCATC
ATGGTACTGC CCGTCGCCAT GTTTGTCGCC AGCGGTTTTG AGCACAGTAT CGCAAACATG
TTTATGATTC CTATGGGTAT TGTAATACGC GATTTTGCTA CACCGGAGTT TTGGACCGCG
GTTGGTTCGT CTCCGGAAAG TTTTTCTCAC CTGACCGTGA TGAGCTTCAT CACTGATAAC
CTGATTCCGG TCACGATCGG TAATATTATC GGCGGCGGTT TGTTGGTCGG GTTGACATAC
TGGGTCATTT ACCTGCGTGG TAACGAGCAT CATTAA
 
Protein sequence
MAKVAEEAGV YKATKHPLKT FYLAITAGVF ISIAFVFYIT ATTGTGAMPY GMAKLIGGIC 
FSLGLILCVI CGADLFTSTV LIVVAKASGR ITWGQLAKNW LNVYFGNLIG ALLFVLLMWL
SGEYMTANGQ WGLNVLQTAD HKMHHTFIEA VCLGILANLM VCLAVWMSYS GRSLMDKAFI
MVLPVAMFVA SGFEHSIANM FMIPMGIVIR DFATPEFWTA VGSSPESFSH LTVMSFITDN
LIPVTIGNII GGGLLVGLTY WVIYLRGNEH H