Gene SeHA_C1034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1034 
Symbolhcr 
ID6491690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1016536 
End bp1017507 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content57% 
IMG OID642741276 
ProductHCP oxidoreductase, NADH-dependent 
Protein accessionYP_002044929 
Protein GI194450523 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin
[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones101 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACGA TGCCAACCTC ACAGTGCCCC TGGCGAATGC AGGTGCATCA CATCCGTCAG 
GAGACGCCGG ATGTATGGAC AATTGCGCTA TTATGCCATG ACTACTACCC TTACCGCGCC
GGGCAGTATG CGCTGGTGAG CGTGCGCAAT TCAGCGGAAA CGCTGCGCGC CTACACCCTT
TCGTCTACGC CGGGCGTCAG TGAATATATT ACGCTGACCG TTCGTCGGAT TGACGATGGC
ACGGGTTCGC AGTGGTTGAC CCATGACATC AAGCGCGGCG ATTACATCTG GCTGTCTGAT
GCAATGGGCG ATTTTACCTG TGACGATAAA ACAGAAGATA AGTTTCTGCT GCTCGCCGCC
GGTTGTGGCG TAACGCCAAT CATGTCGATG CGTCGCTGGC TGGCGAAATA CCGCCCGCAG
GCCGACGTGC AGGTCATCTT TAACGTCCGT TCGCCGGATG ATGTGATTTT TGCCGACGAG
TGGCGACAGT ATCCGGTCAC GCTAGTGGCG GAAAATCATG CCACGGAAGG TTTTGTCGCG
GGCCGTCTGA CCACGGAATT GTTACAGAGC GTACCGGATT TGGCATCGCG CACCATCATG
ACCTGCGGCC CGGCGCCCTA TATGGATTTC GTCGAACAGG GAGTGAAAGC GCTTGGCGTA
ACGCGCTTCT TTAAAGAGAA GTTCTTCACG CCGGTGGCGG AAACGGCAAC CAGCGGCCTG
AAATTCACCA AGCTACAGCC AGCGCAGGAA TTTTATGCCC CGATCGGTAC GACGCTGCTG
GAGGCGCTGG AGAGTAATAA AGTACCGGTT GCCGCTGCCT GTCGGGCAGG TGTTTGCGGC
TGCTGTAAAA CCAAAGTCGT TTCCGGCGAC TATACGGTGA GCAGCACCAT GACGCTGAGC
GAGGCGGAGA TTGCCGAAGG TTACGTACTG GCCTGCTCCT GCCATCCGCA GGGCGATCTT
GTTCTCGCAT AA
 
Protein sequence
MMTMPTSQCP WRMQVHHIRQ ETPDVWTIAL LCHDYYPYRA GQYALVSVRN SAETLRAYTL 
SSTPGVSEYI TLTVRRIDDG TGSQWLTHDI KRGDYIWLSD AMGDFTCDDK TEDKFLLLAA
GCGVTPIMSM RRWLAKYRPQ ADVQVIFNVR SPDDVIFADE WRQYPVTLVA ENHATEGFVA
GRLTTELLQS VPDLASRTIM TCGPAPYMDF VEQGVKALGV TRFFKEKFFT PVAETATSGL
KFTKLQPAQE FYAPIGTTLL EALESNKVPV AAACRAGVCG CCKTKVVSGD YTVSSTMTLS
EAEIAEGYVL ACSCHPQGDL VLA