Gene SeHA_C1014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1014 
SymbolpotI 
ID6490784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp998945 
End bp999790 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content58% 
IMG OID642741257 
Productputrescine transporter subunit: membrane component of ABC superfamily 
Protein accessionYP_002044910 
Protein GI194448412 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones111 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAACT TACCGGTCGT TCGCTCGCCC TGGCGCATTC TGATTCTGGT GCTGGGGTTT 
ACTTTTCTCT ATGCGCCGAT GTTAATGTTG GTGATTTACT CGTTTAACAG TTCGAAGCTG
GTGACGGTGT GGGCGGGATG GTCGACGCGC TGGTATGGCG AGCTCTTTCG GGATACCGCC
ATGATGAGCG CAGTGGGACT AAGCCTGACA ATTGCCGCCT GCGCGGCGAC GATGGCGGTG
GTGCTCGGTA CTATCGCCGC GGTGGTGATG GTGCGATTTG GACGATTTCG CGGCGCAAAC
GGCTTTGCGT TTATGATCAC CGCGCCGCTG GTGATGCCGG ATGTGATTAC CGGGCTGTCG
CTGCTGCTGC TGTTTGTCGC GCTCGGTCAT GCTATCGGCT GGCCCTCCGA TCGCGGGATG
CTGACCATCT GGTTGGCGCA CGTCACTTTC TGTACCGCCT ATGTGGCAGT GGTGATCGCT
TCGCGATTAC GCGAACTGGA TCGTTCGATT GAAGAGGCGG CGATGGATCT TGGCGCGGCG
CCGTTGAAGG TCTTTTTCGT CATTACGTTA CCGATGATCA TGCCAGCGGT GATCTCGGGC
TGGCTGTTGG CCTTTACGCT TTCCCTTGAC GATCTGGTGA TTGCCAGCTT CGTTTCCGGT
CCCGGTGCCA CCACGCTACC GATGCTGGTT TTCTCCAGCG TGCGCATGGG CGTGAACCCG
GAAATCAACG CGCTGGCGAC GTTAATCCTC GGCGTGGTAG GAATCGTCGG ATTTATTGCC
TGGTACCTGA TGGCGCGAGC GGAAAAACAG CGGATTCGCG ATATCCAGCG TGCAAGACGC
GGCTGA
 
Protein sequence
MNNLPVVRSP WRILILVLGF TFLYAPMLML VIYSFNSSKL VTVWAGWSTR WYGELFRDTA 
MMSAVGLSLT IAACAATMAV VLGTIAAVVM VRFGRFRGAN GFAFMITAPL VMPDVITGLS
LLLLFVALGH AIGWPSDRGM LTIWLAHVTF CTAYVAVVIA SRLRELDRSI EEAAMDLGAA
PLKVFFVITL PMIMPAVISG WLLAFTLSLD DLVIASFVSG PGATTLPMLV FSSVRMGVNP
EINALATLIL GVVGIVGFIA WYLMARAEKQ RIRDIQRARR G