Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C1004 |
Symbol | |
ID | 6488114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 989976 |
End bp | 991661 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642741247 |
Product | hypothetical protein |
Protein accession | YP_002044900 |
Protein GI | 194451034 |
COG category | [R] General function prediction only |
COG ID | [COG2985] Predicted permease |
TIGRFAM ID | [TIGR01625] AspT/YidE/YbjL antiporter duplication domain |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.492051 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 100 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATATAA ACGTCGCAGA TTTGTTAAAT GGGAATTACA TCCTGTTATT ATTTGTGGTC CTGGCTCTTG GCCTGTGTCT TGGCAAGTTA CGTCTGGGTT CAGTCCAACT TGGTAATTCC ATTGGCGTTT TAGTGGTCTC TCTATTATTA GGGCAGCAAC ACTTCAGTAT TAACACCGAC GCGCTAAATC TGGGATTTAT GCTGTTTATT TTTTGTGTCG GCGTCGAGGC TGGCCCCAAC TTTTTTTCGA TTTTTTTTCG CGACGGTAAA AATTATCTGA TGCTTGCCCT GGTCATGGTC GGTAGCGCTC TGCTAATCGC CTTAGGCCTT GGTAAGCTAT TCGGCTGGGA TATCGGCCTG ACGGCCGGTA TGCTGGCTGG CTCAATGACC TCCACGCCCG TGCTGGTTGG CGCAGGCGAT ACCCTGCGAC ATTCCGGCAT CGCCAGCACG CAACTCTCCT CCGCTCTTGA TAATCTGAGC CTGGGCTATG CCCTGACCTA TCTGATTGGG TTGGTCAGTC TGATCGTGGG CGCGCGCTAC TTGCCTAAAC TACAGCATCA GGATTTGCAA ACCAGCGCCC AGCAAATTGC TCGCGAGCGC GGTCTGGATA CCGATGCTAA TCGCAAGGTT TATTTGCCGG TTATCCGCGC CTATCGGGTT GGCCCGGAAC TGGTGGCCTG GACTGACGGC AAAAACCTGC GCGAGCTGGG TATTTACCGC CAGACAGGCT GCTATATCGA ACGTATTCGC CGTAACGGTA TTCTGGCGAA CCCGGATGGC GATGCGGTGC TGCAAATGGG CGATGAGATT GCGCTGGTCG GCTATCCGGA CGCGCACGCC AGGCTCGATC CCAGCTTCCG TAATGGTAAG GAAGTGTTTG ATCGCGATCT GCTTGATATG CGCATCGTGA CGGAAGAAAT TGTGGTGAAA AACCACAATG CGGTCGGTCG CCGCCTCGCT CAGCTCAAGC TGACCGATCA TGGCTGCTTC CTTAACCGCG TCATCCGCAG CCAGATCGAA ATGCCTATCG ACGATAACGT CGTGCTGAAT AAAGGCGACG TGTTACAGGT GAGCGGCGAC GCCAGACGCG TAAAAACCAT CGCCGATCGC ATTGGTTTTA TTTCGATTCA TAGTCAGGTG ACGGACCTGC TCGCCTTCTG CGCTTTTTTT ATCATCGGGT TAATGATCGG GATGATTACC TTCCAGTTCA GCAATTTTAG TTTCGGTATC GGCAACGCGG CCGGATTGCT GTTCGCCGGG ATCATGCTCG GTTTCCTGCG CGCTAACCAT CCTACCTTTG GTTATATTCC GCAGGGCGCG CTTAACATGG TGAAAGAATT CGGCTTGATG GTATTTATGG CAGGCGTTGG TTTAAGCGCC GGCAGCGGTA TCAGCAACGG TCTGGGCGCG GTCGGCGGAC AAATGCTGAT CGCCGGACTT GTCGTCAGCC TGGTACCGGT GGTGATCTGC TTCTTGTTTG GCGCTTATGT GCTGCGCATG AATCGGGCGC TGCTGTTCGG CGCCATGATG GGCGCGCGTA CCTGCGCCCC GGCGATGGAA ATCATTAGCG ATACGGCGCG CAGTAATATT CCAGCGCTGG GTTATGCGGG GACTTACGCC ATCGCCAACG TTCTGCTAAC GCTGGCGGGG ACGCTTATTG TCATCATCTG GCCGGGGTTA GGATAA
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Protein sequence | MNINVADLLN GNYILLLFVV LALGLCLGKL RLGSVQLGNS IGVLVVSLLL GQQHFSINTD ALNLGFMLFI FCVGVEAGPN FFSIFFRDGK NYLMLALVMV GSALLIALGL GKLFGWDIGL TAGMLAGSMT STPVLVGAGD TLRHSGIAST QLSSALDNLS LGYALTYLIG LVSLIVGARY LPKLQHQDLQ TSAQQIARER GLDTDANRKV YLPVIRAYRV GPELVAWTDG KNLRELGIYR QTGCYIERIR RNGILANPDG DAVLQMGDEI ALVGYPDAHA RLDPSFRNGK EVFDRDLLDM RIVTEEIVVK NHNAVGRRLA QLKLTDHGCF LNRVIRSQIE MPIDDNVVLN KGDVLQVSGD ARRVKTIADR IGFISIHSQV TDLLAFCAFF IIGLMIGMIT FQFSNFSFGI GNAAGLLFAG IMLGFLRANH PTFGYIPQGA LNMVKEFGLM VFMAGVGLSA GSGISNGLGA VGGQMLIAGL VVSLVPVVIC FLFGAYVLRM NRALLFGAMM GARTCAPAME IISDTARSNI PALGYAGTYA IANVLLTLAG TLIVIIWPGL G
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