Gene SeHA_C1002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1002 
Symbol 
ID6492162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp989239 
End bp989799 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content52% 
IMG OID642741246 
ProductTetR family transcriptional regulator 
Protein accessionYP_002044899 
Protein GI194448868 
COG category[S] Function unknown 
COG ID[COG3226] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.51169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones103 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAA ATGCCGTAAG ACGCGCCAAT GATCCTAAGC GACGGGAAAA AATAATTCAG 
GCCACACTGG AAGCGGTAAA GACCTATGGC GTTCATGCCG TGACGCACCG GAAAATCGCC
GCTATCGCTC AGGTGCCGCT TGGCTCGATG ACCTACTATT TTGCCGGTAT GGATGCGTTA
TTGAGTGAAG CTTTTACACT TTTCACCGAG AACATGTCGC GTCAATACCA GGACTTTTTT
GCGCAGGTGA CGGATGCGGA GGGGGCGTGC CAGGCGATAA CGGAAATGAT TTACGGCTCG
CAGGTTACGA CGCCGGATAA TATGACGTTA ATGTATCAGT TATATGCCTA TGCCAGCGAT
AAGCCAGCGT TAAAAATAGT CATGCAAAAC TGGATGCAGC GTAGCCAGAA TACGCTGGCG
CAGTGGTTTG ACGCGCAGAC CGCCCGCGCG CTGGATGCGT TTATCGAGGG GATGACGCTG
CATTTTGTAA CGGATCGAAC GCCTCTGGCG CGTGAAGCGA TTTTACAGAT GGTAAAGCGA
ATCGCCGGAG CGTCAATGTA G
 
Protein sequence
MKENAVRRAN DPKRREKIIQ ATLEAVKTYG VHAVTHRKIA AIAQVPLGSM TYYFAGMDAL 
LSEAFTLFTE NMSRQYQDFF AQVTDAEGAC QAITEMIYGS QVTTPDNMTL MYQLYAYASD
KPALKIVMQN WMQRSQNTLA QWFDAQTARA LDAFIEGMTL HFVTDRTPLA REAILQMVKR
IAGASM